Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 AC067863.1-201ENST00000494933 530 ntBASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 AC004449.1-201ENST00000564240 433 ntBASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 AC015911.4-201ENST00000588022 1070 ntBASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 AL691403.2-201ENST00000618460 490 ntBASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 AL033527.5-202ENST00000641632 1098 ntBASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 FO538757.1-201ENST00000623083 1397 ntBASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF440Q8IYI8 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 TARDBPP1-201ENST00000442013 1203 ntBASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 TUBB3P1-201ENST00000405796 1332 ntBASIC14.41□□□□□ -0.1
ZNF440Q8IYI8 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF440Q8IYI8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF440Q8IYI8 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.4□□□□□ -0.1
ZNF440Q8IYI8 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.4□□□□□ -0.1
ZNF440Q8IYI8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF440Q8IYI8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF440Q8IYI8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF440Q8IYI8 AC023157.3-201ENST00000619086 2088 ntBASIC14.4□□□□□ -0.1
ZNF440Q8IYI8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.4□□□□□ -0.1
ZNF440Q8IYI8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF440Q8IYI8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF440Q8IYI8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF440Q8IYI8 AC006058.4-201ENST00000624016 1670 ntBASIC14.4□□□□□ -0.1
ZNF440Q8IYI8 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF440Q8IYI8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF440Q8IYI8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
ZNF440Q8IYI8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF440Q8IYI8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF440Q8IYI8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms