Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAD23BP54727 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RAD23BP54727 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAD23BP54727 CICP13-201ENST00000422015 2789 ntBASIC16.88■□□□□ 0.29
RAD23BP54727 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAD23BP54727 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAD23BP54727 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAD23BP54727 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAD23BP54727 MRPS18AP1-201ENST00000414458 589 ntBASIC16.88■□□□□ 0.29
RAD23BP54727 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAD23BP54727 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.88■□□□□ 0.29
RAD23BP54727 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.88■□□□□ 0.29
RAD23BP54727 AL109936.8-201ENST00000641772 604 ntBASIC16.88■□□□□ 0.29
RAD23BP54727 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAD23BP54727 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.88■□□□□ 0.29
RAD23BP54727 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.88■□□□□ 0.29
RAD23BP54727 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
RAD23BP54727 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAD23BP54727 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
RAD23BP54727 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAD23BP54727 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.88■□□□□ 0.29
RAD23BP54727 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAD23BP54727 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAD23BP54727 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAD23BP54727 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAD23BP54727 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RAD23BP54727 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAD23BP54727 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
RAD23BP54727 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAD23BP54727 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.87■□□□□ 0.29
RAD23BP54727 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RAD23BP54727 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
RAD23BP54727 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAD23BP54727 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAD23BP54727 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RAD23BP54727 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAD23BP54727 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.87■□□□□ 0.29
RAD23BP54727 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.87■□□□□ 0.29
RAD23BP54727 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAD23BP54727 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAD23BP54727 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAD23BP54727 AC022144.1-201ENST00000602255 1580 ntBASIC16.87■□□□□ 0.29
RAD23BP54727 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAD23BP54727 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.87■□□□□ 0.29
RAD23BP54727 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.87■□□□□ 0.29
RAD23BP54727 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.87■□□□□ 0.29
RAD23BP54727 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.87■□□□□ 0.29
RAD23BP54727 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAD23BP54727 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAD23BP54727 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.87■□□□□ 0.29
RAD23BP54727 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.87■□□□□ 0.29
RAD23BP54727 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RAD23BP54727 SDHAP3-202ENST00000515467 728 ntBASIC16.87■□□□□ 0.29
RAD23BP54727 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.87■□□□□ 0.29
RAD23BP54727 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.87■□□□□ 0.29
RAD23BP54727 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.87■□□□□ 0.29
RAD23BP54727 AL355385.1-201ENST00000606123 409 ntBASIC16.87■□□□□ 0.29
RAD23BP54727 AC008738.7-201ENST00000609744 511 ntBASIC16.87■□□□□ 0.29
RAD23BP54727 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.87■□□□□ 0.29
RAD23BP54727 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RAD23BP54727 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.87■□□□□ 0.29
RAD23BP54727 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RAD23BP54727 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.87■□□□□ 0.29
RAD23BP54727 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RAD23BP54727 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAD23BP54727 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAD23BP54727 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAD23BP54727 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.87■□□□□ 0.29
RAD23BP54727 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RAD23BP54727 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAD23BP54727 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAD23BP54727 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAD23BP54727 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.86■□□□□ 0.29
RAD23BP54727 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAD23BP54727 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAD23BP54727 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RAD23BP54727 AL512638.1-201ENST00000457493 794 ntBASIC16.86■□□□□ 0.29
RAD23BP54727 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.86■□□□□ 0.29
RAD23BP54727 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.86■□□□□ 0.29
RAD23BP54727 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.86■□□□□ 0.29
RAD23BP54727 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
RAD23BP54727 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.86■□□□□ 0.29
RAD23BP54727 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAD23BP54727 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAD23BP54727 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.86■□□□□ 0.29
RAD23BP54727 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.86■□□□□ 0.29
RAD23BP54727 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
RAD23BP54727 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAD23BP54727 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.86■□□□□ 0.29
RAD23BP54727 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAD23BP54727 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.86■□□□□ 0.29
RAD23BP54727 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD23BP54727 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
RAD23BP54727 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD23BP54727 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD23BP54727 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD23BP54727 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RAD23BP54727 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD23BP54727 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD23BP54727 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms