Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
CKS2P33552 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 POM121L3P-201ENST00000419331 1163 ntBASIC11.67□□□□□ -0.54
CKS2P33552 RBSN-204ENST00000449050 903 ntTSL 2 BASIC11.67□□□□□ -0.54
CKS2P33552 AC245100.5-201ENST00000452108 331 ntBASIC11.67□□□□□ -0.54
CKS2P33552 KRT17P6-201ENST00000453795 1220 ntBASIC11.67□□□□□ -0.54
CKS2P33552 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 CDV3-207ENST00000508481 661 ntTSL 3 BASIC11.67□□□□□ -0.54
CKS2P33552 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC11.67□□□□□ -0.54
CKS2P33552 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
CKS2P33552 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
CKS2P33552 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC11.67□□□□□ -0.54
CKS2P33552 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC11.67□□□□□ -0.54
CKS2P33552 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC11.67□□□□□ -0.54
CKS2P33552 AL022326.1-202ENST00000641533 845 ntBASIC11.67□□□□□ -0.54
CKS2P33552 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
CKS2P33552 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
CKS2P33552 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC11.67□□□□□ -0.54
CKS2P33552 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC11.67□□□□□ -0.54
CKS2P33552 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CKS2P33552 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC11.67□□□□□ -0.54
CKS2P33552 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
CKS2P33552 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC11.67□□□□□ -0.54
CKS2P33552 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
CKS2P33552 AC148477.4-201ENST00000613430 1793 ntBASIC11.67□□□□□ -0.54
CKS2P33552 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
CKS2P33552 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS2P33552 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC11.66□□□□□ -0.54
CKS2P33552 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
CKS2P33552 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
CKS2P33552 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
CKS2P33552 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
CKS2P33552 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CKS2P33552 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC11.66□□□□□ -0.54
CKS2P33552 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
CKS2P33552 KRT18P1-202ENST00000452408 1331 ntBASIC11.66□□□□□ -0.54
CKS2P33552 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC11.66□□□□□ -0.54
CKS2P33552 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC11.66□□□□□ -0.54
CKS2P33552 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC11.66□□□□□ -0.54
CKS2P33552 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 NME2-201ENST00000393183 568 ntTSL 2 BASIC11.66□□□□□ -0.54
CKS2P33552 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC11.66□□□□□ -0.54
CKS2P33552 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 VMO1-203ENST00000416307 712 ntTSL 2 BASIC11.66□□□□□ -0.54
CKS2P33552 AC087499.1-201ENST00000418141 1075 ntBASIC11.66□□□□□ -0.54
CKS2P33552 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.66□□□□□ -0.54
CKS2P33552 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC11.66□□□□□ -0.54
CKS2P33552 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.66□□□□□ -0.54
CKS2P33552 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC11.66□□□□□ -0.54
CKS2P33552 AL589182.2-201ENST00000619332 1049 ntBASIC11.66□□□□□ -0.54
CKS2P33552 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC11.66□□□□□ -0.54
CKS2P33552 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
CKS2P33552 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
CKS2P33552 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.66□□□□□ -0.54
CKS2P33552 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CKS2P33552 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.66□□□□□ -0.54
CKS2P33552 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC11.66□□□□□ -0.54
CKS2P33552 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms