Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB3BP20337 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
RAB3BP20337 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB3BP20337 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RAB3BP20337 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB3BP20337 AC018892.3-201ENST00000623986 2499 ntBASIC13.88□□□□□ -0.19
RAB3BP20337 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB3BP20337 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB3BP20337 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 ZBED1P1-201ENST00000502364 1930 ntBASIC13.88□□□□□ -0.19
RAB3BP20337 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RAB3BP20337 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB3BP20337 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB3BP20337 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RAB3BP20337 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.88□□□□□ -0.19
RAB3BP20337 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RAB3BP20337 KRT18P31-201ENST00000506277 1292 ntBASIC13.88□□□□□ -0.19
RAB3BP20337 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.88□□□□□ -0.19
RAB3BP20337 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.88□□□□□ -0.19
RAB3BP20337 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.88□□□□□ -0.19
RAB3BP20337 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.88□□□□□ -0.19
RAB3BP20337 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB3BP20337 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.88□□□□□ -0.19
RAB3BP20337 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB3BP20337 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RAB3BP20337 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB3BP20337 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RAB3BP20337 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RAB3BP20337 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB3BP20337 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB3BP20337 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB3BP20337 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RAB3BP20337 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RAB3BP20337 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB3BP20337 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RAB3BP20337 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.87□□□□□ -0.19
RAB3BP20337 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RAB3BP20337 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB3BP20337 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RAB3BP20337 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RAB3BP20337 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.87□□□□□ -0.19
RAB3BP20337 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
RAB3BP20337 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB3BP20337 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
RAB3BP20337 AC002347.1-201ENST00000569543 541 ntBASIC13.87□□□□□ -0.19
RAB3BP20337 MIR4313-201ENST00000580760 101 ntBASIC13.87□□□□□ -0.19
RAB3BP20337 MIR1199-201ENST00000621445 119 ntBASIC13.87□□□□□ -0.19
RAB3BP20337 AP000550.4-202ENST00000639755 178 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms