Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.67□□□□□ -0.38
APOC3P02656 BET1L-207ENST00000529614 560 ntTSL 5 BASIC12.67□□□□□ -0.38
APOC3P02656 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.67□□□□□ -0.38
APOC3P02656 AC142381.2-201ENST00000566120 298 ntBASIC12.67□□□□□ -0.38
APOC3P02656 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC12.67□□□□□ -0.38
APOC3P02656 STK25P1-201ENST00000585406 838 ntBASIC12.67□□□□□ -0.38
APOC3P02656 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC3P02656 MIR6786-201ENST00000616843 113 ntBASIC12.67□□□□□ -0.38
APOC3P02656 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOC3P02656 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
APOC3P02656 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC3P02656 KRT16P1-201ENST00000399124 1418 ntBASIC12.67□□□□□ -0.38
APOC3P02656 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC3P02656 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.67□□□□□ -0.38
APOC3P02656 PCDHA5-203ENST00000614258 4248 ntBASIC12.67□□□□□ -0.38
APOC3P02656 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC3P02656 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.67□□□□□ -0.38
APOC3P02656 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOC3P02656 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC3P02656 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC3P02656 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC3P02656 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC3P02656 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOC3P02656 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.67□□□□□ -0.38
APOC3P02656 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
APOC3P02656 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.67□□□□□ -0.38
APOC3P02656 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
APOC3P02656 PCDHB18P-202ENST00000526308 3197 ntBASIC12.67□□□□□ -0.38
APOC3P02656 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOC3P02656 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
APOC3P02656 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC3P02656 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.66□□□□□ -0.38
APOC3P02656 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC3P02656 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.66□□□□□ -0.38
APOC3P02656 AL353732.1-201ENST00000569618 1459 ntBASIC12.66□□□□□ -0.38
APOC3P02656 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC3P02656 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
APOC3P02656 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
APOC3P02656 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC3P02656 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
APOC3P02656 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 AC020658.7-201ENST00000624274 2442 ntBASIC12.66□□□□□ -0.38
APOC3P02656 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
APOC3P02656 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
APOC3P02656 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 ILF2-202ENST00000368681 726 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC3P02656 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.66□□□□□ -0.38
APOC3P02656 PVRIG2P-201ENST00000435460 978 ntBASIC12.66□□□□□ -0.38
APOC3P02656 UBE2SP1-201ENST00000450587 669 ntBASIC12.66□□□□□ -0.38
APOC3P02656 B3GAT3P1-201ENST00000471720 806 ntBASIC12.66□□□□□ -0.38
APOC3P02656 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC3P02656 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.66□□□□□ -0.38
APOC3P02656 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC12.66□□□□□ -0.38
APOC3P02656 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC3P02656 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
APOC3P02656 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC3P02656 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC3P02656 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC3P02656 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC3P02656 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC3P02656 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.65□□□□□ -0.38
APOC3P02656 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC3P02656 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
APOC3P02656 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC3P02656 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC3P02656 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC3P02656 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms