Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM3O75382 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM3O75382 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.79□□□□□ -0.04
TRIM3O75382 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM3O75382 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRIM3O75382 BASP1P1-201ENST00000430708 665 ntBASIC14.79□□□□□ -0.04
TRIM3O75382 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM3O75382 HLA-V-204ENST00000476601 1289 ntBASIC14.79□□□□□ -0.04
TRIM3O75382 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM3O75382 RNA5SP421-201ENST00000516864 134 ntBASIC14.79□□□□□ -0.04
TRIM3O75382 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
TRIM3O75382 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.79□□□□□ -0.04
TRIM3O75382 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM3O75382 AL096865.1-201ENST00000606796 927 ntBASIC14.79□□□□□ -0.04
TRIM3O75382 SPDYE12P-201ENST00000618416 771 ntBASIC14.79□□□□□ -0.04
TRIM3O75382 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRIM3O75382 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM3O75382 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM3O75382 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM3O75382 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM3O75382 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM3O75382 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM3O75382 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM3O75382 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM3O75382 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
TRIM3O75382 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.78□□□□□ -0.04
TRIM3O75382 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.78□□□□□ -0.04
TRIM3O75382 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 BCRP1-201ENST00000444246 691 ntBASIC14.78□□□□□ -0.04
TRIM3O75382 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.78□□□□□ -0.04
TRIM3O75382 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.78□□□□□ -0.04
TRIM3O75382 IGHV3-42-201ENST00000520410 361 ntBASIC14.78□□□□□ -0.04
TRIM3O75382 AC027369.6-201ENST00000525520 931 ntBASIC14.78□□□□□ -0.04
TRIM3O75382 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRIM3O75382 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM3O75382 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.78□□□□□ -0.04
TRIM3O75382 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRIM3O75382 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.78□□□□□ -0.04
TRIM3O75382 AC026979.3-201ENST00000607315 403 ntBASIC14.78□□□□□ -0.04
TRIM3O75382 AL138828.2-201ENST00000615812 383 ntBASIC14.78□□□□□ -0.04
TRIM3O75382 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.78□□□□□ -0.04
TRIM3O75382 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM3O75382 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
TRIM3O75382 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRIM3O75382 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM3O75382 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRIM3O75382 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM3O75382 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM3O75382 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM3O75382 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRIM3O75382 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TRIM3O75382 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM3O75382 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM3O75382 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM3O75382 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM3O75382 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
TRIM3O75382 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.77□□□□□ -0.04
TRIM3O75382 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.77□□□□□ -0.04
TRIM3O75382 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM3O75382 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM3O75382 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TRIM3O75382 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM3O75382 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
TRIM3O75382 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM3O75382 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM3O75382 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM3O75382 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM3O75382 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms