Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CFAP99D6REC4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CFAP99D6REC4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CFAP99D6REC4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CFAP99D6REC4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CFAP99D6REC4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.82■□□□□ 0.12
CFAP99D6REC4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CFAP99D6REC4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.82■□□□□ 0.12
CFAP99D6REC4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.82■□□□□ 0.12
CFAP99D6REC4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.82■□□□□ 0.12
CFAP99D6REC4 AC106028.4-201ENST00000614509 607 ntBASIC15.82■□□□□ 0.12
CFAP99D6REC4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CFAP99D6REC4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CFAP99D6REC4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CFAP99D6REC4 AC010491.1-201ENST00000563101 2797 ntBASIC15.82■□□□□ 0.12
CFAP99D6REC4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CFAP99D6REC4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CFAP99D6REC4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CFAP99D6REC4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CFAP99D6REC4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CFAP99D6REC4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CFAP99D6REC4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CFAP99D6REC4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.82■□□□□ 0.12
CFAP99D6REC4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CFAP99D6REC4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CFAP99D6REC4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CFAP99D6REC4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.82■□□□□ 0.12
CFAP99D6REC4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CFAP99D6REC4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CFAP99D6REC4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.82■□□□□ 0.12
CFAP99D6REC4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 LST1-206ENST00000376090 689 ntTSL 2 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 LST1-209ENST00000376096 565 ntTSL 2 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 LST1-210ENST00000376099 610 ntTSL 2 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 MIR943-201ENST00000401286 94 ntBASIC15.81■□□□□ 0.12
CFAP99D6REC4 LST1-214ENST00000418507 726 ntTSL 2 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 IGHV3-42-201ENST00000520410 361 ntBASIC15.81■□□□□ 0.12
CFAP99D6REC4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 AL450472.2-201ENST00000603663 1156 ntBASIC15.81■□□□□ 0.12
CFAP99D6REC4 SPDYE12P-201ENST00000618416 771 ntBASIC15.81■□□□□ 0.12
CFAP99D6REC4 MIR6069-201ENST00000620069 79 ntBASIC15.81■□□□□ 0.12
CFAP99D6REC4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 AP001002.2-201ENST00000625137 386 ntBASIC15.81■□□□□ 0.12
CFAP99D6REC4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.81■□□□□ 0.12
CFAP99D6REC4 AL365209.1-201ENST00000624418 6473 ntBASIC15.81■□□□□ 0.12
CFAP99D6REC4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CFAP99D6REC4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CFAP99D6REC4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CFAP99D6REC4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CFAP99D6REC4 AL365203.3-201ENST00000609742 2057 ntBASIC15.8■□□□□ 0.12
CFAP99D6REC4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
CFAP99D6REC4 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CFAP99D6REC4 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CFAP99D6REC4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.8■□□□□ 0.12
CFAP99D6REC4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CFAP99D6REC4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CFAP99D6REC4 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CFAP99D6REC4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms