Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AL139010.1-201ENST00000454878 894 ntBASIC15.17■□□□□ 0.02
RAB43Q86YS6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB43Q86YS6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.17■□□□□ 0.02
RAB43Q86YS6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
RAB43Q86YS6 AC140912.1-201ENST00000577171 1054 ntBASIC15.17■□□□□ 0.02
RAB43Q86YS6 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RAB43Q86YS6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RAB43Q86YS6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB43Q86YS6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB43Q86YS6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RAB43Q86YS6 GGT4P-201ENST00000623672 1708 ntBASIC15.17■□□□□ 0.02
RAB43Q86YS6 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB43Q86YS6 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB43Q86YS6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB43Q86YS6 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
RAB43Q86YS6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB43Q86YS6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB43Q86YS6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB43Q86YS6 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB43Q86YS6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB43Q86YS6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB43Q86YS6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB43Q86YS6 AC007541.1-201ENST00000570282 1469 ntBASIC15.16■□□□□ 0.02
RAB43Q86YS6 KRT8P12-202ENST00000472924 1397 ntBASIC15.16■□□□□ 0.02
RAB43Q86YS6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB43Q86YS6 GK-202ENST00000378941 458 ntTSL 3 BASIC15.16■□□□□ 0.02
RAB43Q86YS6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB43Q86YS6 AC087499.6-201ENST00000411576 835 ntBASIC15.16■□□□□ 0.02
RAB43Q86YS6 KRT17P7-201ENST00000451704 1104 ntBASIC15.16■□□□□ 0.02
RAB43Q86YS6 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.16■□□□□ 0.02
RAB43Q86YS6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB43Q86YS6 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB43Q86YS6 AL596325.1-201ENST00000563991 1082 ntBASIC15.16■□□□□ 0.02
RAB43Q86YS6 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB43Q86YS6 AL365330.1-201ENST00000607459 531 ntBASIC15.16■□□□□ 0.02
RAB43Q86YS6 AC004840.1-201ENST00000636359 365 ntBASIC15.16■□□□□ 0.02
RAB43Q86YS6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB43Q86YS6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB43Q86YS6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RAB43Q86YS6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.16■□□□□ 0.02
RAB43Q86YS6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RAB43Q86YS6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB43Q86YS6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB43Q86YS6 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB43Q86YS6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB43Q86YS6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RAB43Q86YS6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.16■□□□□ 0.02
RAB43Q86YS6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RAB43Q86YS6 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB43Q86YS6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB43Q86YS6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB43Q86YS6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB43Q86YS6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RAB43Q86YS6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 TCAF2P1-201ENST00000291129 2421 ntBASIC15.15■□□□□ 0.02
RAB43Q86YS6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB43Q86YS6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 AC092364.2-201ENST00000596710 2692 ntBASIC15.15■□□□□ 0.02
RAB43Q86YS6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 LINC01144-201ENST00000626198 1710 ntBASIC15.15■□□□□ 0.02
RAB43Q86YS6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 AL391825.1-201ENST00000457671 1364 ntBASIC15.15■□□□□ 0.02
RAB43Q86YS6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAB43Q86YS6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB43Q86YS6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.15■□□□□ 0.02
RAB43Q86YS6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB43Q86YS6 DFFBP1-201ENST00000433250 979 ntBASIC15.15■□□□□ 0.02
RAB43Q86YS6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB43Q86YS6 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 AC010336.2-201ENST00000564226 506 ntBASIC15.15■□□□□ 0.02
RAB43Q86YS6 TP53TG3HP-202ENST00000569755 579 ntBASIC15.15■□□□□ 0.02
RAB43Q86YS6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.15■□□□□ 0.02
RAB43Q86YS6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.15■□□□□ 0.02
RAB43Q86YS6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
RAB43Q86YS6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 MIR6069-201ENST00000620069 79 ntBASIC15.15■□□□□ 0.02
RAB43Q86YS6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAB43Q86YS6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB43Q86YS6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB43Q86YS6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB43Q86YS6 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAB43Q86YS6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB43Q86YS6 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms