Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 AC009407.1-201ENST00000568958 598 ntBASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 AC008738.7-201ENST00000609744 511 ntBASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB11FIP4Q86YS3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 PPT1-215ENST00000641471 2368 ntBASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 AC004890.2-204ENST00000481968 304 ntBASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 AC004790.1-201ENST00000612686 536 ntBASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 MIR6069-201ENST00000620069 79 ntBASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB11FIP4Q86YS3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB11FIP4Q86YS3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB11FIP4Q86YS3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
RAB11FIP4Q86YS3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB11FIP4Q86YS3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB11FIP4Q86YS3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
RAB11FIP4Q86YS3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RAB11FIP4Q86YS3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 AC013268.4-201ENST00000637413 2228 ntBASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 MRPS18AP1-201ENST00000414458 589 ntBASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 AL589987.1-201ENST00000453380 819 ntBASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.51■□□□□ 0.55
RAB11FIP4Q86YS3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms