Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 AC018892.3-201ENST00000623986 2499 ntBASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 RPL13AP23-201ENST00000480739 586 ntBASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 AC061975.2-201ENST00000581722 295 ntBASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 AC099522.2-201ENST00000607001 744 ntBASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SMARCD3Q6STE5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 AL691432.1-201ENST00000596308 1422 ntBASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.47□□□□□ -0.09
SMARCD3Q6STE5 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 AKAP8P1-201ENST00000434743 1349 ntBASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms