Protein–RNA interactions for Protein: Q02742

GCNT1, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT1Q02742 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.82■□□□□ 0.28
GCNT1Q02742 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GCNT1Q02742 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GCNT1Q02742 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GCNT1Q02742 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.82■□□□□ 0.28
GCNT1Q02742 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.82■□□□□ 0.28
GCNT1Q02742 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.82■□□□□ 0.28
GCNT1Q02742 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
GCNT1Q02742 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.82■□□□□ 0.28
GCNT1Q02742 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.82■□□□□ 0.28
GCNT1Q02742 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GCNT1Q02742 AC138035.3-201ENST00000622706 2791 ntBASIC16.82■□□□□ 0.28
GCNT1Q02742 KRT8P44-201ENST00000441609 1350 ntBASIC16.82■□□□□ 0.28
GCNT1Q02742 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GCNT1Q02742 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GCNT1Q02742 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GCNT1Q02742 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GCNT1Q02742 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GCNT1Q02742 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GCNT1Q02742 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GCNT1Q02742 AL133267.1-201ENST00000398220 340 ntBASIC16.82■□□□□ 0.28
GCNT1Q02742 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.82■□□□□ 0.28
GCNT1Q02742 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.82■□□□□ 0.28
GCNT1Q02742 AC114501.2-201ENST00000439631 535 ntBASIC16.82■□□□□ 0.28
GCNT1Q02742 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.82■□□□□ 0.28
GCNT1Q02742 AC015910.1-201ENST00000579400 975 ntBASIC16.82■□□□□ 0.28
GCNT1Q02742 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.82■□□□□ 0.28
GCNT1Q02742 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.82■□□□□ 0.28
GCNT1Q02742 AC093512.1-201ENST00000617969 520 ntBASIC16.82■□□□□ 0.28
GCNT1Q02742 AF228730.6-201ENST00000641497 218 ntBASIC16.82■□□□□ 0.28
GCNT1Q02742 AC084121.3-201ENST00000641716 218 ntBASIC16.82■□□□□ 0.28
GCNT1Q02742 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.82■□□□□ 0.28
GCNT1Q02742 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GCNT1Q02742 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GCNT1Q02742 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GCNT1Q02742 AC023157.3-201ENST00000619086 2088 ntBASIC16.82■□□□□ 0.28
GCNT1Q02742 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
GCNT1Q02742 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
GCNT1Q02742 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GCNT1Q02742 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.82■□□□□ 0.28
GCNT1Q02742 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.82■□□□□ 0.28
GCNT1Q02742 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.82■□□□□ 0.28
GCNT1Q02742 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
GCNT1Q02742 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.81■□□□□ 0.28
GCNT1Q02742 HYMAI-201ENST00000635591 3347 ntBASIC16.81■□□□□ 0.28
GCNT1Q02742 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GCNT1Q02742 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 AC126365.1-201ENST00000578585 1514 ntBASIC16.81■□□□□ 0.28
GCNT1Q02742 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.81■□□□□ 0.28
GCNT1Q02742 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.81■□□□□ 0.28
GCNT1Q02742 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.81■□□□□ 0.28
GCNT1Q02742 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.81■□□□□ 0.28
GCNT1Q02742 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.81■□□□□ 0.28
GCNT1Q02742 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.81■□□□□ 0.28
GCNT1Q02742 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
GCNT1Q02742 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.81■□□□□ 0.28
GCNT1Q02742 PMS2P2-201ENST00000425039 1128 ntBASIC16.81■□□□□ 0.28
GCNT1Q02742 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.81■□□□□ 0.28
GCNT1Q02742 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.81■□□□□ 0.28
GCNT1Q02742 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.81■□□□□ 0.28
GCNT1Q02742 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GCNT1Q02742 RFPL4AP1-201ENST00000530883 850 ntBASIC16.81■□□□□ 0.28
GCNT1Q02742 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.81■□□□□ 0.28
GCNT1Q02742 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.81■□□□□ 0.28
GCNT1Q02742 AC092337.1-201ENST00000568699 1129 ntBASIC16.81■□□□□ 0.28
GCNT1Q02742 AL390955.2-201ENST00000603032 514 ntBASIC16.81■□□□□ 0.28
GCNT1Q02742 AL390754.1-201ENST00000619088 582 ntBASIC16.81■□□□□ 0.28
GCNT1Q02742 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.81■□□□□ 0.28
GCNT1Q02742 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.81■□□□□ 0.28
GCNT1Q02742 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.81■□□□□ 0.28
GCNT1Q02742 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.81■□□□□ 0.28
GCNT1Q02742 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.81■□□□□ 0.28
GCNT1Q02742 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCNT1Q02742 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms