Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SUMO3P55854 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SUMO3P55854 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SUMO3P55854 AC022532.1-201ENST00000624563 1728 ntBASIC14.26□□□□□ -0.13
SUMO3P55854 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.26□□□□□ -0.13
SUMO3P55854 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SUMO3P55854 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SUMO3P55854 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
SUMO3P55854 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SUMO3P55854 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SUMO3P55854 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
SUMO3P55854 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SUMO3P55854 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.25□□□□□ -0.13
SUMO3P55854 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.25□□□□□ -0.13
SUMO3P55854 AC068587.6-202ENST00000641839 5619 ntBASIC14.25□□□□□ -0.13
SUMO3P55854 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SUMO3P55854 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.25□□□□□ -0.13
SUMO3P55854 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SUMO3P55854 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
SUMO3P55854 AC092850.2-201ENST00000623821 2697 ntBASIC14.25□□□□□ -0.13
SUMO3P55854 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.25□□□□□ -0.13
SUMO3P55854 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.25□□□□□ -0.13
SUMO3P55854 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SUMO3P55854 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SUMO3P55854 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
SUMO3P55854 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SUMO3P55854 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SUMO3P55854 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SUMO3P55854 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SUMO3P55854 MRPS18AP1-201ENST00000414458 589 ntBASIC14.25□□□□□ -0.13
SUMO3P55854 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.25□□□□□ -0.13
SUMO3P55854 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
SUMO3P55854 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.25□□□□□ -0.13
SUMO3P55854 FAM8A3P-201ENST00000427218 844 ntBASIC14.25□□□□□ -0.13
SUMO3P55854 KRT18P64-201ENST00000434946 1219 ntBASIC14.25□□□□□ -0.13
SUMO3P55854 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.25□□□□□ -0.13
SUMO3P55854 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SUMO3P55854 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.25□□□□□ -0.13
SUMO3P55854 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.25□□□□□ -0.13
SUMO3P55854 AC000095.1-201ENST00000603208 874 ntBASIC14.25□□□□□ -0.13
SUMO3P55854 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.25□□□□□ -0.13
SUMO3P55854 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SUMO3P55854 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.25□□□□□ -0.13
SUMO3P55854 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SUMO3P55854 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SUMO3P55854 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
SUMO3P55854 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SUMO3P55854 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
SUMO3P55854 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SUMO3P55854 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SUMO3P55854 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SUMO3P55854 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.25□□□□□ -0.13
SUMO3P55854 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SUMO3P55854 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SUMO3P55854 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.25□□□□□ -0.13
SUMO3P55854 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SUMO3P55854 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SUMO3P55854 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.24□□□□□ -0.13
SUMO3P55854 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SUMO3P55854 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SUMO3P55854 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SUMO3P55854 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SUMO3P55854 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SUMO3P55854 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.24□□□□□ -0.13
SUMO3P55854 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SUMO3P55854 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SUMO3P55854 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SUMO3P55854 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SUMO3P55854 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SUMO3P55854 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SUMO3P55854 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SUMO3P55854 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.24□□□□□ -0.13
SUMO3P55854 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.24□□□□□ -0.13
SUMO3P55854 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SUMO3P55854 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SUMO3P55854 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.24□□□□□ -0.13
SUMO3P55854 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SUMO3P55854 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SUMO3P55854 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SUMO3P55854 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.24□□□□□ -0.13
SUMO3P55854 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.24□□□□□ -0.13
SUMO3P55854 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.24□□□□□ -0.13
SUMO3P55854 AC104794.3-201ENST00000566840 1248 ntBASIC14.24□□□□□ -0.13
SUMO3P55854 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.24□□□□□ -0.13
SUMO3P55854 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SUMO3P55854 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.24□□□□□ -0.13
SUMO3P55854 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.24□□□□□ -0.13
SUMO3P55854 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.24□□□□□ -0.13
SUMO3P55854 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.24□□□□□ -0.13
SUMO3P55854 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SUMO3P55854 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SUMO3P55854 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.24□□□□□ -0.13
SUMO3P55854 AL121723.1-201ENST00000445194 1519 ntBASIC14.24□□□□□ -0.13
SUMO3P55854 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.24□□□□□ -0.13
SUMO3P55854 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.24□□□□□ -0.13
SUMO3P55854 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SUMO3P55854 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SUMO3P55854 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SUMO3P55854 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SUMO3P55854 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms