Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.07□□□□□ -0.48
TCRAP04437 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.07□□□□□ -0.48
TCRAP04437 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
TCRAP04437 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
TCRAP04437 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.07□□□□□ -0.48
TCRAP04437 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.07□□□□□ -0.48
TCRAP04437 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 PRSS29P-201ENST00000440800 595 ntBASIC12.07□□□□□ -0.48
TCRAP04437 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.07□□□□□ -0.48
TCRAP04437 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
TCRAP04437 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.07□□□□□ -0.48
TCRAP04437 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.07□□□□□ -0.48
TCRAP04437 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.07□□□□□ -0.48
TCRAP04437 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 MIR4313-201ENST00000580760 101 ntBASIC12.07□□□□□ -0.48
TCRAP04437 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.07□□□□□ -0.48
TCRAP04437 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.07□□□□□ -0.48
TCRAP04437 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
TCRAP04437 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.07□□□□□ -0.48
TCRAP04437 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.07□□□□□ -0.48
TCRAP04437 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
TCRAP04437 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.07□□□□□ -0.48
TCRAP04437 AP002414.3-201ENST00000589352 1468 ntBASIC12.07□□□□□ -0.48
TCRAP04437 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TCRAP04437 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.07□□□□□ -0.48
TCRAP04437 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.07□□□□□ -0.48
TCRAP04437 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.07□□□□□ -0.48
TCRAP04437 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
TCRAP04437 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TCRAP04437 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TCRAP04437 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.06□□□□□ -0.48
TCRAP04437 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
TCRAP04437 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.06□□□□□ -0.48
TCRAP04437 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TCRAP04437 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TCRAP04437 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.06□□□□□ -0.48
TCRAP04437 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
TCRAP04437 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.06□□□□□ -0.48
TCRAP04437 AC092474.2-201ENST00000424288 719 ntBASIC12.06□□□□□ -0.48
TCRAP04437 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.06□□□□□ -0.48
TCRAP04437 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.06□□□□□ -0.48
TCRAP04437 PRYP6-201ENST00000514804 343 ntBASIC12.06□□□□□ -0.48
TCRAP04437 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.06□□□□□ -0.48
TCRAP04437 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.06□□□□□ -0.48
TCRAP04437 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.06□□□□□ -0.48
TCRAP04437 MIR4751-201ENST00000578027 74 ntBASIC12.06□□□□□ -0.48
TCRAP04437 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.06□□□□□ -0.48
TCRAP04437 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.06□□□□□ -0.48
TCRAP04437 AJ011931.1-201ENST00000618749 2492 ntBASIC12.06□□□□□ -0.48
TCRAP04437 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
TCRAP04437 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.06□□□□□ -0.48
TCRAP04437 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 REXO1L1P-202ENST00000608646 1974 ntBASIC12.06□□□□□ -0.48
TCRAP04437 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.06□□□□□ -0.48
TCRAP04437 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
TCRAP04437 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
TCRAP04437 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRAP04437 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms