Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAF4Q9BUZ4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 TUBB8P12-201ENST00000308911 1335 ntBASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 TUBB7P-202ENST00000428444 1305 ntBASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 TUBB8P7-204ENST00000567960 1332 ntBASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 COX20P2-201ENST00000452636 358 ntBASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAF4Q9BUZ4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAF4Q9BUZ4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAF4Q9BUZ4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRAF4Q9BUZ4 AC006449.6-201ENST00000612330 2296 ntBASIC14.21□□□□□ -0.14
TRAF4Q9BUZ4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAF4Q9BUZ4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAF4Q9BUZ4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAF4Q9BUZ4 FO538757.1-201ENST00000623083 1397 ntBASIC14.21□□□□□ -0.14
TRAF4Q9BUZ4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAF4Q9BUZ4 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
TRAF4Q9BUZ4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF4Q9BUZ4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF4Q9BUZ4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
TRAF4Q9BUZ4 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF4Q9BUZ4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAF4Q9BUZ4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF4Q9BUZ4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.2□□□□□ -0.14
TRAF4Q9BUZ4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAF4Q9BUZ4 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAF4Q9BUZ4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAF4Q9BUZ4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAF4Q9BUZ4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF4Q9BUZ4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAF4Q9BUZ4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF4Q9BUZ4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAF4Q9BUZ4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF4Q9BUZ4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
TRAF4Q9BUZ4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRAF4Q9BUZ4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms