Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 AC004840.1-201ENST00000636359 365 ntBASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 MIR648-201ENST00000385046 94 ntBASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 AC023824.1-201ENST00000562945 2975 ntBASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM48Q8IWZ4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM48Q8IWZ4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms