Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH8P55286 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH8P55286 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH8P55286 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH8P55286 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.84■□□□□ 0.29
CDH8P55286 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH8P55286 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH8P55286 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH8P55286 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH8P55286 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.84■□□□□ 0.29
CDH8P55286 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH8P55286 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH8P55286 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH8P55286 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH8P55286 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH8P55286 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH8P55286 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH8P55286 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH8P55286 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH8P55286 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH8P55286 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH8P55286 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH8P55286 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH8P55286 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH8P55286 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH8P55286 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDH8P55286 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH8P55286 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH8P55286 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH8P55286 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH8P55286 MEIS3P1-201ENST00000495167 958 ntBASIC16.83■□□□□ 0.28
CDH8P55286 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH8P55286 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH8P55286 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.83■□□□□ 0.28
CDH8P55286 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH8P55286 AC007541.1-201ENST00000570282 1469 ntBASIC16.83■□□□□ 0.28
CDH8P55286 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH8P55286 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH8P55286 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.83■□□□□ 0.28
CDH8P55286 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CDH8P55286 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH8P55286 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDH8P55286 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CDH8P55286 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH8P55286 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH8P55286 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH8P55286 AC127383.1-201ENST00000444697 1800 ntBASIC16.82■□□□□ 0.28
CDH8P55286 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH8P55286 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH8P55286 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH8P55286 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH8P55286 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH8P55286 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH8P55286 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH8P55286 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH8P55286 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH8P55286 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDH8P55286 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH8P55286 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDH8P55286 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH8P55286 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH8P55286 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH8P55286 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH8P55286 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH8P55286 TERF1P3-201ENST00000505638 1227 ntBASIC16.82■□□□□ 0.28
CDH8P55286 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH8P55286 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH8P55286 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.82■□□□□ 0.28
CDH8P55286 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH8P55286 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH8P55286 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH8P55286 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH8P55286 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH8P55286 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH8P55286 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH8P55286 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH8P55286 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDH8P55286 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH8P55286 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH8P55286 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH8P55286 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH8P55286 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDH8P55286 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH8P55286 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH8P55286 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CDH8P55286 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH8P55286 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH8P55286 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH8P55286 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDH8P55286 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH8P55286 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH8P55286 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CDH8P55286 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.81■□□□□ 0.28
CDH8P55286 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDH8P55286 TOMM22P5-201ENST00000416399 439 ntBASIC16.81■□□□□ 0.28
CDH8P55286 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH8P55286 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH8P55286 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.81■□□□□ 0.28
CDH8P55286 TPRX2P-201ENST00000535362 881 ntBASIC16.81■□□□□ 0.28
CDH8P55286 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms