Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 MST1-209ENST00000484269 1518 ntTSL 517.79■□□□□ 0.445e-16■□□□□ 11.3
RPS3P23396 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.155e-16■□□□□ 11.3
RPS3P23396 MST1-211ENST00000488350 4152 ntTSL 513.61□□□□□ -0.235e-16■□□□□ 11.3
RPS3P23396 FN1-219ENST00000474036 1058 ntTSL 24.89□□□□□ -1.633e-49■□□□□ 11.3
RPS3P23396 UBE2K-205ENST00000510719 566 ntTSL 38.78□□□□□ -17e-16■□□□□ 11.3
RPS3P23396 SLC39A14-212ENST00000524285 570 ntTSL 417.13■□□□□ 0.333e-24■□□□□ 11.3
RPS3P23396 ERBB3-216ENST00000550869 572 ntTSL 411.96□□□□□ -0.491e-6■□□□□ 11.3
RPS3P23396 DAP3-217ENST00000477394 816 ntTSL 59.07□□□□□ -0.962e-6■□□□□ 11.3
RPS3P23396 DAP3-206ENST00000462978 689 ntTSL 35.71□□□□□ -1.52e-6■□□□□ 11.3
RPS3P23396 DAP3-219ENST00000479151 725 ntTSL 53.84□□□□□ -1.792e-6■□□□□ 11.3
RPS3P23396 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.01■□□□□ 0.794e-15■□□□□ 11.3
RPS3P23396 SFXN1-208ENST00000507823 2611 ntTSL 217.55■□□□□ 0.41e-6■□□□□ 11.3
RPS3P23396 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.121e-6■□□□□ 11.3
RPS3P23396 RRBP1-209ENST00000495501 832 ntTSL 519.57■□□□□ 0.725e-16■□□□□ 11.3
RPS3P23396 AHNAK-203ENST00000525875 793 ntTSL 310.48□□□□□ -0.731e-6■□□□□ 11.3
RPS3P23396 SERPINA1-213ENST00000555289 609 ntTSL 511.75□□□□□ -0.536e-58■□□□□ 11.3
RPS3P23396 TXNIP-202ENST00000486597 509 ntTSL 24.64□□□□□ -1.677e-26■□□□□ 11.3
RPS3P23396 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.198e-8■□□□□ 11.3
RPS3P23396 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.789e-7■□□□□ 11.3
RPS3P23396 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.699e-7■□□□□ 11.3
RPS3P23396 PCSK6-203ENST00000557794 1196 ntTSL 511.15□□□□□ -0.629e-7■□□□□ 11.3
RPS3P23396 PCSK6-202ENST00000398185 3723 ntTSL 1 (best)8.87□□□□□ -0.999e-7■□□□□ 11.3
RPS3P23396 NACA-210ENST00000548386 644 ntTSL 21.38□□□□□ -2.193e-18■□□□□ 11.3
RPS3P23396 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.033e-16■□□□□ 11.3
RPS3P23396 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.333e-16■□□□□ 11.3
RPS3P23396 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.53e-16■□□□□ 11.3
RPS3P23396 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.861e-6■□□□□ 11.3
RPS3P23396 C1orf122-203ENST00000419397 223 ntTSL 525.31■■□□□ 1.641e-6■□□□□ 11.3
RPS3P23396 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.451e-6■□□□□ 11.3
RPS3P23396 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.141e-6■□□□□ 11.3
RPS3P23396 EEF1D-212ENST00000525695 907 ntTSL 521.9■■□□□ 1.11e-6■□□□□ 11.3
RPS3P23396 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.971e-6■□□□□ 11.3
RPS3P23396 MFSD12-214ENST00000615073 986 ntTSL 320.31■□□□□ 0.841e-6■□□□□ 11.3
RPS3P23396 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.771e-6■□□□□ 11.3
RPS3P23396 MFSD12-209ENST00000589063 590 ntTSL 319.33■□□□□ 0.681e-6■□□□□ 11.3
RPS3P23396 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.97■□□□□ 0.632e-6■□□□□ 11.3
RPS3P23396 MFSD12-203ENST00000398558 1014 ntTSL 218.94■□□□□ 0.621e-6■□□□□ 11.3
RPS3P23396 EPHB4-207ENST00000489808 921 ntTSL 1 (best)18.61■□□□□ 0.571e-6■□□□□ 11.3
RPS3P23396 PNPLA6-210ENST00000595176 999 ntTSL 317.95■□□□□ 0.461e-6■□□□□ 11.3
RPS3P23396 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.441e-6■□□□□ 11.3
RPS3P23396 PNPLA6-217ENST00000599311 1005 ntTSL 516.87■□□□□ 0.291e-6■□□□□ 11.3
RPS3P23396 SLC6A6-211ENST00000622810 565 ntTSL 416.62■□□□□ 0.251e-6■□□□□ 11.3
RPS3P23396 EPHB4-204ENST00000477446 1551 ntTSL 1 (best)16.53■□□□□ 0.241e-6■□□□□ 11.3
RPS3P23396 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.21e-6■□□□□ 11.3
RPS3P23396 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.04■□□□□ 0.161e-6■□□□□ 11.3
RPS3P23396 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.141e-6■□□□□ 11.3
RPS3P23396 GYS1-203ENST00000457974 718 ntTSL 315.65■□□□□ 0.11e-6■□□□□ 11.3
RPS3P23396 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.4■□□□□ 0.061e-6■□□□□ 11.3
RPS3P23396 PNPLA6-211ENST00000595264 800 ntTSL 314.55□□□□□ -0.081e-6■□□□□ 11.3
RPS3P23396 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.081e-6■□□□□ 11.3
RPS3P23396 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.11e-6■□□□□ 11.3
RPS3P23396 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.09□□□□□ -0.151e-6■□□□□ 11.3
RPS3P23396 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.01□□□□□ -0.171e-6■□□□□ 11.3
RPS3P23396 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.231e-6■□□□□ 11.3
RPS3P23396 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.291e-6■□□□□ 11.3
RPS3P23396 PNPLA6-207ENST00000594551 574 ntTSL 413.24□□□□□ -0.291e-6■□□□□ 11.3
RPS3P23396 EEF1D-215ENST00000526340 770 ntTSL 312.94□□□□□ -0.341e-6■□□□□ 11.3
RPS3P23396 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC12.46□□□□□ -0.421e-6■□□□□ 11.3
RPS3P23396 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.431e-6■□□□□ 11.3
RPS3P23396 PRPF8-214ENST00000576585 2157 ntTSL 212.31□□□□□ -0.441e-6■□□□□ 11.3
RPS3P23396 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC11.94□□□□□ -0.51e-6■□□□□ 11.3
RPS3P23396 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.511e-6■□□□□ 11.3
RPS3P23396 GYS1-202ENST00000323798 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.551e-6■□□□□ 11.3
RPS3P23396 EPHB4-202ENST00000360620 3789 ntTSL 1 (best) BASIC11.52□□□□□ -0.561e-6■□□□□ 11.3
RPS3P23396 MAN2B2-204ENST00000505907 7719 ntAPPRIS ALT2 TSL 211.2□□□□□ -0.621e-6■□□□□ 11.3
RPS3P23396 GYS1-201ENST00000263276 3378 ntTSL 1 (best) BASIC10.59□□□□□ -0.711e-6■□□□□ 11.3
RPS3P23396 SMAD3-211ENST00000559460 568 ntTSL 48.84□□□□□ -0.991e-6■□□□□ 11.3
RPS3P23396 SPTAN1-225ENST00000631121 438 ntTSL 27.62□□□□□ -1.196e-14■□□□□ 11.3
RPS3P23396 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.211e-6■□□□□ 11.3
RPS3P23396 SUB1-202ENST00000502453 4273 ntTSL 1 (best)3.01□□□□□ -1.932e-6■□□□□ 11.3
RPS3P23396 CLU-212ENST00000522413 654 ntTSL 313.76□□□□□ -0.216e-13■□□□□ 11.3
RPS3P23396 TECR-218ENST00000599646 2899 nt11.18□□□□□ -0.621e-15■□□□□ 11.3
RPS3P23396 IDI1-203ENST00000429642 1017 ntTSL 522.16■■□□□ 1.146e-25■□□□□ 11.3
RPS3P23396 IDI1-204ENST00000482091 1029 ntTSL 512.54□□□□□ -0.46e-25■□□□□ 11.3
RPS3P23396 IDI1-202ENST00000427898 441 ntTSL 27.12□□□□□ -1.276e-25■□□□□ 11.3
RPS3P23396 LAMB1-205ENST00000439976 703 ntTSL 515.37■□□□□ 0.057e-9■□□□□ 11.3
RPS3P23396 LAMB1-202ENST00000393559 550 ntTSL 213.57□□□□□ -0.247e-9■□□□□ 11.3
RPS3P23396 MARS-228ENST00000552371 699 ntTSL 310.11□□□□□ -0.791e-8■□□□□ 11.3
RPS3P23396 GART-218ENST00000497313 457 ntTSL 37.56□□□□□ -1.23e-8■□□□□ 11.3
RPS3P23396 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.716e-7■□□□□ 11.3
RPS3P23396 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.166e-7■□□□□ 11.3
RPS3P23396 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.086e-7■□□□□ 11.3
RPS3P23396 RAB5C-204ENST00000547517 1167 ntTSL 1 (best) BASIC11.51□□□□□ -0.576e-7■□□□□ 11.3
RPS3P23396 AC099811.2-202ENST00000592248 694 ntTSL 310.37□□□□□ -0.756e-7■□□□□ 11.3
RPS3P23396 VIM-207ENST00000495528 962 ntTSL 25.97□□□□□ -1.451e-9■□□□□ 11.3
RPS3P23396 CD99-207ENST00000482293 466 ntTSL 219.89■□□□□ 0.775e-17■□□□□ 11.3
RPS3P23396 CD99-206ENST00000449611 604 ntAPPRIS ALT2 TSL 517.32■□□□□ 0.365e-17■□□□□ 11.3
RPS3P23396 KIF22-204ENST00000563263 600 ntTSL 38.99□□□□□ -0.974e-6■□□□□ 11.3
RPS3P23396 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.624e-10■□□□□ 11.3
RPS3P23396 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC8.85□□□□□ -0.994e-10■□□□□ 11.3
RPS3P23396 SND1-207ENST00000468621 494 ntTSL 45.35□□□□□ -1.556e-8■□□□□ 11.3
RPS3P23396 FUS-207ENST00000487974 643 ntTSL 215.89■□□□□ 0.134e-26■□□□□ 11.3
RPS3P23396 VIM-202ENST00000421459 753 ntTSL 27.67□□□□□ -1.189e-7■□□□□ 11.3
RPS3P23396 ERBB3-219ENST00000551242 2755 ntTSL 1 (best)11.79□□□□□ -0.527e-7■□□□□ 11.3
RPS3P23396 ERBB3-217ENST00000551085 4382 ntTSL 211.35□□□□□ -0.597e-7■□□□□ 11.3
RPS3P23396 ERBB3-201ENST00000267101 5919 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.697e-7■□□□□ 11.3
RPS3P23396 COL9A3-204ENST00000463487 760 ntTSL 519.43■□□□□ 0.75e-8■□□□□ 11.3
RPS3P23396 HNRNPC-209ENST00000554383 1039 ntTSL 59.6□□□□□ -0.876e-16■□□□□ 11.3
RPS3P23396 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.065e-11■□□□□ 11.3
RPS3P23396 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.15e-11■□□□□ 11.3
Retrieved 100 of 24,271 protein–RNA pairs in 426.5 ms