RNA–Protein interactions for RNA: ENST00000551085.5

ERBB3-217, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2

Gene ERBB3, Length 4,382 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-217ENST00000551085 NISCHQ9Y2I1 1504 aa19.97■□□□□ 0.79
ERBB3-217ENST00000551085 PELP1Q8IZL8 1130 aaKnown RBP19.12■□□□□ 0.65
ERBB3-217ENST00000551085 HRCP23327 699 aa19■□□□□ 0.63
ERBB3-217ENST00000551085 SUPT5HO00267 1087 aaKnown RBP18.9■□□□□ 0.62
ERBB3-217ENST00000551085 PCGF6Q9BYE7 350 aa18.87■□□□□ 0.61
ERBB3-217ENST00000551085 SHROOM4Q9ULL8 1493 aa18.64■□□□□ 0.57
ERBB3-217ENST00000551085 MYT1Q01538 1121 aa18.6■□□□□ 0.57
ERBB3-217ENST00000551085 PPARGC1BQ86YN6 1023 aaKnown RBP18.58■□□□□ 0.56
ERBB3-217ENST00000551085 ZEB1P37275 1124 aaPredicted RBP18.28■□□□□ 0.52
ERBB3-217ENST00000551085 DCAF8L2P0C7V8 631 aa18.13■□□□□ 0.49
ERBB3-217ENST00000551085 TRIM26Q12899 539 aaPredicted RBP18.1■□□□□ 0.49
ERBB3-217ENST00000551085 CHIC1Q5VXU3 224 aa18.1■□□□□ 0.49
ERBB3-217ENST00000551085 CENPBP07199 599 aaPredicted RBP18.05■□□□□ 0.48
ERBB3-217ENST00000551085 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
ERBB3-217ENST00000551085 LOC105371045A0A1W2PR82 267 aa17.85■□□□□ 0.45
ERBB3-217ENST00000551085 ACIN1Q9UKV3 1341 aaKnown RBP17.72■□□□□ 0.43
ERBB3-217ENST00000551085 GTF3C3Q9Y5Q9 886 aa17.72■□□□□ 0.43
ERBB3-217ENST00000551085 MYO15BQ96JP2 1530 aa17.7■□□□□ 0.42
ERBB3-217ENST00000551085 EHMT2Q96KQ7 1210 aa17.69■□□□□ 0.42
ERBB3-217ENST00000551085 CCER1Q8TC90 406 aaPredicted RBP17.68■□□□□ 0.42
ERBB3-217ENST00000551085 DCAF1Q9Y4B6 1507 aa17.68■□□□□ 0.42
ERBB3-217ENST00000551085 FAM9AQ8IZU1 332 aaPredicted RBP17.59■□□□□ 0.41
ERBB3-217ENST00000551085 YTHDC1Q96MU7 727 aaKnown RBP17.56■□□□□ 0.4
ERBB3-217ENST00000551085 NEUROD1Q13562 356 aa17.54■□□□□ 0.4
ERBB3-217ENST00000551085 DIEXFQ68CQ4 756 aaKnown RBP17.51■□□□□ 0.39
ERBB3-217ENST00000551085 TRIM41Q8WV44 630 aa17.43■□□□□ 0.38
ERBB3-217ENST00000551085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.37■□□□□ 0.37
ERBB3-217ENST00000551085 CCDC180Q9P1Z9 1646 aa17.34■□□□□ 0.37
ERBB3-217ENST00000551085 TTBK1Q5TCY1 1321 aaPredicted RBP17.31■□□□□ 0.36
ERBB3-217ENST00000551085 ZNF316A6NFI3 1004 aaPredicted RBP17.06■□□□□ 0.32
ERBB3-217ENST00000551085 ERICH6Q7L0X2 663 aa17.01■□□□□ 0.31
ERBB3-217ENST00000551085 BCL11AQ9H165 835 aa16.91■□□□□ 0.3
ERBB3-217ENST00000551085 ZCCHC6Q5VYS8 1495 aaKnown RBP16.9■□□□□ 0.3
ERBB3-217ENST00000551085 ANP32EQ9BTT0 268 aa16.88■□□□□ 0.29
ERBB3-217ENST00000551085 NEFLP07196 543 aa16.87■□□□□ 0.29
ERBB3-217ENST00000551085 APLP2Q06481 763 aa16.86■□□□□ 0.29
ERBB3-217ENST00000551085 CLSPNQ9HAW4 1339 aa16.85■□□□□ 0.29
ERBB3-217ENST00000551085 MIER1Q8N108 512 aa16.82■□□□□ 0.28
ERBB3-217ENST00000551085 HNRNPUL2Q1KMD3 747 aaKnown RBP16.76■□□□□ 0.27
ERBB3-217ENST00000551085 UBTFP17480 764 aaKnown RBP16.74■□□□□ 0.27
ERBB3-217ENST00000551085 BCANQ96GW7 911 aa16.73■□□□□ 0.27
ERBB3-217ENST00000551085 SUPT16HQ9Y5B9 1047 aaKnown RBP16.62■□□□□ 0.25
ERBB3-217ENST00000551085 CSRNP3Q8WYN3 585 aa16.57■□□□□ 0.24
ERBB3-217ENST00000551085 TSHZ2Q9NRE2 1034 aa16.53■□□□□ 0.24
ERBB3-217ENST00000551085 FKBP8Q14318 412 aa16.5■□□□□ 0.23
ERBB3-217ENST00000551085 RANGAP1P46060 587 aaPredicted RBP16.48■□□□□ 0.23
ERBB3-217ENST00000551085 CDK11AQ9UQ88 783 aaPredicted RBP16.39■□□□□ 0.21
ERBB3-217ENST00000551085 MYT1LQ9UL68 1186 aa16.36■□□□□ 0.21
ERBB3-217ENST00000551085 RTL5Q5HYW3 569 aaPredicted RBP16.31■□□□□ 0.2
ERBB3-217ENST00000551085 RBM19Q9Y4C8 960 aaKnown RBP16.29■□□□□ 0.2
ERBB3-217ENST00000551085 ITGAEP38570 1179 aa16.28■□□□□ 0.2
ERBB3-217ENST00000551085 RSF1Q96T23 1441 aaPredicted RBP16.26■□□□□ 0.19
ERBB3-217ENST00000551085 CEP162Q5TB80 1403 aa16.22■□□□□ 0.19
ERBB3-217ENST00000551085 ANP32CO43423 234 aa16.19■□□□□ 0.18
ERBB3-217ENST00000551085 TRIM52Q96A61 297 aa16.16■□□□□ 0.18
ERBB3-217ENST00000551085 PRKCSHP14314 528 aaPredicted RBP16.15■□□□□ 0.18
ERBB3-217ENST00000551085 DDX10Q13206 875 aaKnown RBP16.13■□□□□ 0.17
ERBB3-217ENST00000551085 NBR1Q14596 966 aa16.11■□□□□ 0.17
ERBB3-217ENST00000551085 DEKP35659 375 aaKnown RBP16.09■□□□□ 0.17
ERBB3-217ENST00000551085 RB1CC1Q8TDY2 1594 aa16.07■□□□□ 0.16
ERBB3-217ENST00000551085 TNIKQ9UKE5 1360 aa16.07■□□□□ 0.16
ERBB3-217ENST00000551085 WRNQ14191 1432 aaPredicted RBP eCLIP16.04■□□□□ 0.16
ERBB3-217ENST00000551085 ABCC9O60706 1549 aa16.03■□□□□ 0.16
ERBB3-217ENST00000551085 ANP32AP39687 249 aaKnown RBP16.01■□□□□ 0.15
ERBB3-217ENST00000551085 IRX6P78412 446 aaPredicted RBP16.01■□□□□ 0.15
ERBB3-217ENST00000551085 HNRNPUQ00839 825 aaKnown RBP eCLIP15.99■□□□□ 0.15
ERBB3-217ENST00000551085 SCRIBQ14160 1630 aa15.97■□□□□ 0.15
ERBB3-217ENST00000551085 EIF5BO60841 1220 aaKnown RBP15.95■□□□□ 0.14
ERBB3-217ENST00000551085 KCNH8Q96L42 1107 aa15.94■□□□□ 0.14
ERBB3-217ENST00000551085 FANCIQ9NVI1 1328 aa15.91■□□□□ 0.14
ERBB3-217ENST00000551085 CLIP1P30622 1438 aa15.91■□□□□ 0.14
ERBB3-217ENST00000551085 GOLGA3Q08378 1498 aa15.9■□□□□ 0.14
ERBB3-217ENST00000551085 NOP58Q9Y2X3 529 aaKnown RBP15.9■□□□□ 0.14
ERBB3-217ENST00000551085 ZBTB47Q9UFB7 747 aaPredicted RBP15.89■□□□□ 0.14
ERBB3-217ENST00000551085 ATP1B4Q9UN42 357 aaPredicted RBP15.89■□□□□ 0.14
ERBB3-217ENST00000551085 EEA1Q15075 1411 aa15.89■□□□□ 0.13
ERBB3-217ENST00000551085 DAXXQ9UER7 740 aaPredicted RBP15.89■□□□□ 0.13
ERBB3-217ENST00000551085 RTN4Q9NQC3 1192 aaKnown RBP15.87■□□□□ 0.13
ERBB3-217ENST00000551085 HIRIP3Q9BW71 556 aaPredicted RBP15.84■□□□□ 0.13
ERBB3-217ENST00000551085 ERICH6BQ5W0A0 696 aa15.82■□□□□ 0.12
ERBB3-217ENST00000551085 FAM50AQ14320 339 aaKnown RBP15.82■□□□□ 0.12
ERBB3-217ENST00000551085 PPP4R2Q9NY27 417 aa15.82■□□□□ 0.12
ERBB3-217ENST00000551085 CCER2I3L3R5 266 aa15.81■□□□□ 0.12
ERBB3-217ENST00000551085 SOGA1O94964 1423 aa15.81■□□□□ 0.12
ERBB3-217ENST00000551085 NPM2Q86SE8 214 aaKnown RBP15.8■□□□□ 0.12
ERBB3-217ENST00000551085 MSH5O43196 834 aa15.8■□□□□ 0.12
ERBB3-217ENST00000551085 ANO8Q9HCE9 1232 aaPredicted RBP15.8■□□□□ 0.12
ERBB3-217ENST00000551085 DHX57Q6P158 1386 aaKnown RBP15.77■□□□□ 0.12
ERBB3-217ENST00000551085 CNGB1Q14028 1251 aaPredicted RBP15.75■□□□□ 0.11
ERBB3-217ENST00000551085 CCDC88BA6NC98 1476 aa15.74■□□□□ 0.11
ERBB3-217ENST00000551085 CCDC136Q96JN2 1154 aa15.74■□□□□ 0.11
ERBB3-217ENST00000551085 B4GALNT3Q6L9W6 998 aa15.73■□□□□ 0.11
ERBB3-217ENST00000551085 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.72■□□□□ 0.11
ERBB3-217ENST00000551085 VPS8Q8N3P4 1428 aa15.72■□□□□ 0.11
ERBB3-217ENST00000551085 FAM9BQ8IZU0 186 aa15.71■□□□□ 0.11
ERBB3-217ENST00000551085 CEP164Q9UPV0 1460 aa15.69■□□□□ 0.1
ERBB3-217ENST00000551085 TONSLQ96HA7 1378 aa15.69■□□□□ 0.1
ERBB3-217ENST00000551085 CECR2Q9BXF3 1484 aa15.68■□□□□ 0.1
ERBB3-217ENST00000551085 POLR3GLQ9BT43 218 aa15.66■□□□□ 0.1
ERBB3-217ENST00000551085 ABCC8Q09428 1581 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms