Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM21P19474 AC073389.1-201ENST00000595595 795 ntBASIC17.51■□□□□ 0.39
TRIM21P19474 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRIM21P19474 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRIM21P19474 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM21P19474 AC092127.1-201ENST00000567093 3455 ntBASIC17.51■□□□□ 0.39
TRIM21P19474 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
TRIM21P19474 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM21P19474 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
TRIM21P19474 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM21P19474 MST1L-201ENST00000442552 2185 ntBASIC17.5■□□□□ 0.39
TRIM21P19474 AC006486.2-201ENST00000624246 2199 ntBASIC17.5■□□□□ 0.39
TRIM21P19474 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRIM21P19474 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM21P19474 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRIM21P19474 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM21P19474 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRIM21P19474 AL109954.1-202ENST00000564051 2148 ntBASIC17.5■□□□□ 0.39
TRIM21P19474 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRIM21P19474 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM21P19474 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM21P19474 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM21P19474 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM21P19474 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM21P19474 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM21P19474 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM21P19474 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM21P19474 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM21P19474 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM21P19474 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM21P19474 AL627223.1-201ENST00000416693 442 ntBASIC17.5■□□□□ 0.39
TRIM21P19474 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM21P19474 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM21P19474 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM21P19474 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM21P19474 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM21P19474 AC024267.1-201ENST00000582320 895 ntBASIC17.5■□□□□ 0.39
TRIM21P19474 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.5■□□□□ 0.39
TRIM21P19474 AP001160.2-201ENST00000596071 487 ntBASIC17.5■□□□□ 0.39
TRIM21P19474 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM21P19474 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.5■□□□□ 0.39
TRIM21P19474 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TRIM21P19474 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM21P19474 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRIM21P19474 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM21P19474 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
TRIM21P19474 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM21P19474 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM21P19474 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM21P19474 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM21P19474 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM21P19474 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM21P19474 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM21P19474 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
TRIM21P19474 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRIM21P19474 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM21P19474 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM21P19474 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM21P19474 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM21P19474 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM21P19474 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM21P19474 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM21P19474 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM21P19474 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM21P19474 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM21P19474 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM21P19474 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM21P19474 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM21P19474 AC098859.1-201ENST00000502915 1238 ntBASIC17.49■□□□□ 0.39
TRIM21P19474 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
TRIM21P19474 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRIM21P19474 AP000842.3-202ENST00000569238 1080 ntBASIC17.49■□□□□ 0.39
TRIM21P19474 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM21P19474 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TRIM21P19474 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRIM21P19474 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 AC138035.3-201ENST00000622706 2791 ntBASIC17.49■□□□□ 0.39
TRIM21P19474 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM21P19474 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms