Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLPXO76031 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLPXO76031 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLPXO76031 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.46□□□□□ -0.09
CLPXO76031 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLPXO76031 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLPXO76031 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLPXO76031 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLPXO76031 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLPXO76031 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLPXO76031 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CLPXO76031 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLPXO76031 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLPXO76031 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLPXO76031 AC003669.1-201ENST00000334569 611 ntBASIC14.46□□□□□ -0.09
CLPXO76031 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
CLPXO76031 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.46□□□□□ -0.09
CLPXO76031 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.46□□□□□ -0.09
CLPXO76031 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.46□□□□□ -0.09
CLPXO76031 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLPXO76031 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.46□□□□□ -0.09
CLPXO76031 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.46□□□□□ -0.09
CLPXO76031 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CLPXO76031 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CLPXO76031 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLPXO76031 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.46□□□□□ -0.09
CLPXO76031 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.46□□□□□ -0.09
CLPXO76031 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.46□□□□□ -0.09
CLPXO76031 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLPXO76031 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
CLPXO76031 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLPXO76031 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.46□□□□□ -0.09
CLPXO76031 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLPXO76031 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CLPXO76031 BX640514.1-201ENST00000583223 1918 ntBASIC14.46□□□□□ -0.09
CLPXO76031 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.46□□□□□ -0.09
CLPXO76031 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CLPXO76031 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLPXO76031 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLPXO76031 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CLPXO76031 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLPXO76031 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLPXO76031 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CLPXO76031 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.46□□□□□ -0.1
CLPXO76031 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.46□□□□□ -0.1
CLPXO76031 AC126365.1-201ENST00000578585 1514 ntBASIC14.46□□□□□ -0.1
CLPXO76031 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLPXO76031 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLPXO76031 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLPXO76031 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.46□□□□□ -0.1
CLPXO76031 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.45□□□□□ -0.1
CLPXO76031 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
CLPXO76031 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.45□□□□□ -0.1
CLPXO76031 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CLPXO76031 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CLPXO76031 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CLPXO76031 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CLPXO76031 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.45□□□□□ -0.1
CLPXO76031 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.45□□□□□ -0.1
CLPXO76031 AP002469.2-201ENST00000531724 424 ntBASIC14.45□□□□□ -0.1
CLPXO76031 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.45□□□□□ -0.1
CLPXO76031 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.45□□□□□ -0.1
CLPXO76031 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CLPXO76031 AL121912.1-201ENST00000603683 238 ntBASIC14.45□□□□□ -0.1
CLPXO76031 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.45□□□□□ -0.1
CLPXO76031 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.45□□□□□ -0.1
CLPXO76031 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 DGCR9-201ENST00000609630 2415 ntBASIC14.45□□□□□ -0.1
CLPXO76031 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CLPXO76031 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.45□□□□□ -0.1
CLPXO76031 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CLPXO76031 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 INTS4P1-201ENST00000438455 1935 ntBASIC14.45□□□□□ -0.1
CLPXO76031 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.45□□□□□ -0.1
CLPXO76031 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLPXO76031 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms