Protein–RNA interactions for Protein: A6NGH7

CCDC160, Coiled-coil domain-containing protein 160, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC160A6NGH7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 AL359881.3-201ENST00000602640 1721 ntBASIC14.73□□□□□ -0.05
CCDC160A6NGH7 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 AC026366.1-201ENST00000488803 879 ntBASIC14.73□□□□□ -0.05
CCDC160A6NGH7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC160A6NGH7 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 AL592424.1-201ENST00000563624 1536 ntBASIC14.72□□□□□ -0.05
CCDC160A6NGH7 AC126365.1-201ENST00000578585 1514 ntBASIC14.72□□□□□ -0.05
CCDC160A6NGH7 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 AC003669.1-201ENST00000334569 611 ntBASIC14.72□□□□□ -0.05
CCDC160A6NGH7 AP002414.1-201ENST00000391405 1147 ntBASIC14.72□□□□□ -0.05
CCDC160A6NGH7 KLF4P1-201ENST00000412782 1185 ntBASIC14.72□□□□□ -0.05
CCDC160A6NGH7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CCDC160A6NGH7 CD177P1-201ENST00000606252 935 ntBASIC14.72□□□□□ -0.05
CCDC160A6NGH7 AC092666.2-201ENST00000613287 246 ntBASIC14.72□□□□□ -0.05
CCDC160A6NGH7 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms