Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 AC018529.2-202ENST00000611482 3087 ntBASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 AC015802.1-201ENST00000588104 1449 ntBASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLIRPQ9GZT3 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 MIR4321-201ENST00000592276 80 ntBASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 AC139887.4-201ENST00000607877 719 ntBASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms