Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 TOMM22P5-201ENST00000416399 439 ntBASIC16.4■□□□□ 0.22
TRNP1Q6NT89 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 AC135586.1-201ENST00000539323 574 ntBASIC16.4■□□□□ 0.22
TRNP1Q6NT89 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRNP1Q6NT89 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRNP1Q6NT89 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.39■□□□□ 0.22
TRNP1Q6NT89 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
TRNP1Q6NT89 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 AL109954.1-202ENST00000564051 2148 ntBASIC16.39■□□□□ 0.21
TRNP1Q6NT89 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 MIR770-201ENST00000390219 98 ntBASIC16.39■□□□□ 0.21
TRNP1Q6NT89 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 AC104794.3-201ENST00000566840 1248 ntBASIC16.39■□□□□ 0.21
TRNP1Q6NT89 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 BTBD7P1-201ENST00000447253 1453 ntBASIC16.39■□□□□ 0.21
TRNP1Q6NT89 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
TRNP1Q6NT89 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRNP1Q6NT89 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRNP1Q6NT89 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRNP1Q6NT89 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRNP1Q6NT89 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRNP1Q6NT89 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.38■□□□□ 0.21
TRNP1Q6NT89 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRNP1Q6NT89 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.38■□□□□ 0.21
TRNP1Q6NT89 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.38■□□□□ 0.21
TRNP1Q6NT89 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRNP1Q6NT89 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRNP1Q6NT89 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRNP1Q6NT89 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRNP1Q6NT89 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRNP1Q6NT89 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRNP1Q6NT89 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.38■□□□□ 0.21
TRNP1Q6NT89 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRNP1Q6NT89 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRNP1Q6NT89 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.38■□□□□ 0.21
TRNP1Q6NT89 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms