Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
NR1H2P55055 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NR1H2P55055 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR1H2P55055 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NR1H2P55055 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NR1H2P55055 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.12■□□□□ 0.01
NR1H2P55055 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR1H2P55055 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.12■□□□□ 0.01
NR1H2P55055 UPF3AP3-201ENST00000420996 769 ntBASIC15.12■□□□□ 0.01
NR1H2P55055 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NR1H2P55055 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.12■□□□□ 0.01
NR1H2P55055 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.12■□□□□ 0.01
NR1H2P55055 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.12■□□□□ 0.01
NR1H2P55055 STK25P1-201ENST00000585406 838 ntBASIC15.12■□□□□ 0.01
NR1H2P55055 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.12■□□□□ 0.01
NR1H2P55055 AP003680.1-201ENST00000598970 3660 ntBASIC15.12■□□□□ 0.01
NR1H2P55055 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR1H2P55055 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NR1H2P55055 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR1H2P55055 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NR1H2P55055 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.12■□□□□ 0.01
NR1H2P55055 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NR1H2P55055 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.12■□□□□ 0.01
NR1H2P55055 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
NR1H2P55055 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR1H2P55055 AC091951.1-201ENST00000512854 2465 ntBASIC15.11■□□□□ 0.01
NR1H2P55055 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
NR1H2P55055 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NR1H2P55055 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR1H2P55055 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.11■□□□□ 0.01
NR1H2P55055 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.11■□□□□ 0.01
NR1H2P55055 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR1H2P55055 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR1H2P55055 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.11■□□□□ 0.01
NR1H2P55055 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR1H2P55055 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
NR1H2P55055 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR1H2P55055 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.11■□□□□ 0.01
NR1H2P55055 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.11■□□□□ 0.01
NR1H2P55055 AC004832.2-201ENST00000426397 482 ntBASIC15.11■□□□□ 0.01
NR1H2P55055 AC007967.2-201ENST00000432613 625 ntBASIC15.11■□□□□ 0.01
NR1H2P55055 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.11■□□□□ 0.01
NR1H2P55055 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.11■□□□□ 0.01
NR1H2P55055 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.11■□□□□ 0.01
NR1H2P55055 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.11■□□□□ 0.01
NR1H2P55055 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.11■□□□□ 0.01
NR1H2P55055 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.11■□□□□ 0.01
NR1H2P55055 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.11■□□□□ 0.01
NR1H2P55055 AL139424.1-201ENST00000607572 797 ntBASIC15.11■□□□□ 0.01
NR1H2P55055 AC064836.3-201ENST00000607928 673 ntBASIC15.11■□□□□ 0.01
NR1H2P55055 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NR1H2P55055 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.11■□□□□ 0.01
NR1H2P55055 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.11■□□□□ 0.01
NR1H2P55055 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.11■□□□□ 0.01
NR1H2P55055 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
NR1H2P55055 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR1H2P55055 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.11■□□□□ 0.01
NR1H2P55055 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR1H2P55055 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR1H2P55055 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NR1H2P55055 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR1H2P55055 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
NR1H2P55055 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
NR1H2P55055 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NR1H2P55055 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR1H2P55055 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.11■□□□□ 0.01
NR1H2P55055 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR1H2P55055 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR1H2P55055 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR1H2P55055 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR1H2P55055 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.11■□□□□ 0.01
NR1H2P55055 MROH4P-201ENST00000431302 1578 ntBASIC15.11■□□□□ 0.01
NR1H2P55055 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR1H2P55055 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR1H2P55055 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR1H2P55055 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NR1H2P55055 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR1H2P55055 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR1H2P55055 AL031731.1-201ENST00000642131 2094 ntBASIC15.1■□□□□ 0.01
NR1H2P55055 KRT8P49-201ENST00000604166 1432 ntBASIC15.1■□□□□ 0.01
NR1H2P55055 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NR1H2P55055 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR1H2P55055 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.1■□□□□ 0.01
NR1H2P55055 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR1H2P55055 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NR1H2P55055 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR1H2P55055 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NR1H2P55055 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NR1H2P55055 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NR1H2P55055 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR1H2P55055 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR1H2P55055 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.1■□□□□ 0.01
NR1H2P55055 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NR1H2P55055 CRYGEP-201ENST00000412192 528 ntBASIC15.1■□□□□ 0.01
NR1H2P55055 ELK2BP-201ENST00000415014 1224 ntBASIC15.1■□□□□ 0.01
NR1H2P55055 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.1■□□□□ 0.01
NR1H2P55055 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.1■□□□□ 0.01
NR1H2P55055 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
NR1H2P55055 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR1H2P55055 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms