Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.5■□□□□ 0.23
MMP13P45452 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.5■□□□□ 0.23
MMP13P45452 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.5■□□□□ 0.23
MMP13P45452 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
MMP13P45452 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
MMP13P45452 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
MMP13P45452 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.5■□□□□ 0.23
MMP13P45452 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
MMP13P45452 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
MMP13P45452 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.5■□□□□ 0.23
MMP13P45452 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.5■□□□□ 0.23
MMP13P45452 HAUS4P1-201ENST00000406739 1145 ntBASIC16.5■□□□□ 0.23
MMP13P45452 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
MMP13P45452 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
MMP13P45452 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.5■□□□□ 0.23
MMP13P45452 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
MMP13P45452 AC006538.3-201ENST00000612495 578 ntBASIC16.5■□□□□ 0.23
MMP13P45452 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
MMP13P45452 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.5■□□□□ 0.23
MMP13P45452 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 AP003680.1-201ENST00000598970 3660 ntBASIC16.5■□□□□ 0.23
MMP13P45452 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
MMP13P45452 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP13P45452 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP13P45452 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
MMP13P45452 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP13P45452 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP13P45452 SPDYE14P-201ENST00000442619 822 ntBASIC16.49■□□□□ 0.23
MMP13P45452 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.49■□□□□ 0.23
MMP13P45452 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP13P45452 AC026150.2-201ENST00000564693 1156 ntBASIC16.49■□□□□ 0.23
MMP13P45452 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.49■□□□□ 0.23
MMP13P45452 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.49■□□□□ 0.23
MMP13P45452 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP13P45452 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.49■□□□□ 0.23
MMP13P45452 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
MMP13P45452 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP13P45452 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP13P45452 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP13P45452 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.49■□□□□ 0.23
MMP13P45452 AC005089.1-201ENST00000619486 2241 ntBASIC16.49■□□□□ 0.23
MMP13P45452 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MMP13P45452 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP13P45452 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
MMP13P45452 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
MMP13P45452 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.48■□□□□ 0.23
MMP13P45452 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 CICP23-201ENST00000605013 2741 ntBASIC16.48■□□□□ 0.23
MMP13P45452 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
MMP13P45452 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
MMP13P45452 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MMP13P45452 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MMP13P45452 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.48■□□□□ 0.23
MMP13P45452 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms