Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
CCND1P24385 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.03■□□□□ 0.16
CCND1P24385 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.03■□□□□ 0.16
CCND1P24385 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.03■□□□□ 0.16
CCND1P24385 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 PMS2P7-201ENST00000506558 1336 ntBASIC16.03■□□□□ 0.16
CCND1P24385 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.03■□□□□ 0.16
CCND1P24385 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CCND1P24385 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CCND1P24385 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.03■□□□□ 0.16
CCND1P24385 MIR940-201ENST00000401276 94 ntBASIC16.03■□□□□ 0.16
CCND1P24385 KRT18P34-201ENST00000488218 1270 ntBASIC16.03■□□□□ 0.16
CCND1P24385 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.03■□□□□ 0.16
CCND1P24385 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.03■□□□□ 0.16
CCND1P24385 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.03■□□□□ 0.16
CCND1P24385 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.03■□□□□ 0.16
CCND1P24385 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.03■□□□□ 0.16
CCND1P24385 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CCND1P24385 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
CCND1P24385 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
CCND1P24385 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CCND1P24385 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCND1P24385 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CCND1P24385 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCND1P24385 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCND1P24385 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CCND1P24385 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CCND1P24385 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCND1P24385 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.02■□□□□ 0.16
CCND1P24385 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCND1P24385 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.02■□□□□ 0.16
CCND1P24385 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCND1P24385 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CCND1P24385 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCND1P24385 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCND1P24385 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCND1P24385 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CCND1P24385 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCND1P24385 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CCND1P24385 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.02■□□□□ 0.16
CCND1P24385 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.02■□□□□ 0.16
CCND1P24385 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.02■□□□□ 0.16
CCND1P24385 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.02■□□□□ 0.16
CCND1P24385 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CCND1P24385 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.02■□□□□ 0.16
CCND1P24385 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCND1P24385 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCND1P24385 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CCND1P24385 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.02■□□□□ 0.16
CCND1P24385 AP002472.1-201ENST00000577490 586 ntBASIC16.02■□□□□ 0.16
CCND1P24385 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.02■□□□□ 0.16
CCND1P24385 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.02■□□□□ 0.16
CCND1P24385 AC092865.6-201ENST00000642101 219 ntBASIC16.02■□□□□ 0.16
CCND1P24385 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCND1P24385 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CCND1P24385 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCND1P24385 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCND1P24385 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCND1P24385 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
CCND1P24385 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.02■□□□□ 0.15
CCND1P24385 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
CCND1P24385 AC005252.3-201ENST00000623855 2258 ntBASIC16.02■□□□□ 0.15
CCND1P24385 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.02■□□□□ 0.15
CCND1P24385 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCND1P24385 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
CCND1P24385 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CCND1P24385 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CCND1P24385 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.02■□□□□ 0.15
CCND1P24385 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.02■□□□□ 0.15
CCND1P24385 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.02■□□□□ 0.15
CCND1P24385 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.01■□□□□ 0.15
CCND1P24385 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CCND1P24385 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCND1P24385 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCND1P24385 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCND1P24385 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.01■□□□□ 0.15
CCND1P24385 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCND1P24385 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCND1P24385 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms