Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.16■□□□□ 0.02
BCKDHAP12694 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
BCKDHAP12694 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
BCKDHAP12694 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BCKDHAP12694 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BCKDHAP12694 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BCKDHAP12694 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
BCKDHAP12694 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BCKDHAP12694 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.15■□□□□ 0.02
BCKDHAP12694 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.15■□□□□ 0.02
BCKDHAP12694 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.15■□□□□ 0.02
BCKDHAP12694 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
BCKDHAP12694 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
BCKDHAP12694 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BCKDHAP12694 KRT8P44-201ENST00000441609 1350 ntBASIC15.15■□□□□ 0.02
BCKDHAP12694 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
BCKDHAP12694 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.15■□□□□ 0.02
BCKDHAP12694 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BCKDHAP12694 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.15■□□□□ 0.02
BCKDHAP12694 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
BCKDHAP12694 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.15■□□□□ 0.02
BCKDHAP12694 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.15■□□□□ 0.02
BCKDHAP12694 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BCKDHAP12694 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BCKDHAP12694 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
BCKDHAP12694 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BCKDHAP12694 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
BCKDHAP12694 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.15■□□□□ 0.02
BCKDHAP12694 HTR5BP-201ENST00000430851 1154 ntBASIC15.15■□□□□ 0.02
BCKDHAP12694 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.15■□□□□ 0.02
BCKDHAP12694 MKNK2P1-201ENST00000437526 628 ntBASIC15.15■□□□□ 0.02
BCKDHAP12694 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
BCKDHAP12694 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BCKDHAP12694 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.15■□□□□ 0.02
BCKDHAP12694 RARRES2P9-201ENST00000565168 469 ntBASIC15.15■□□□□ 0.02
BCKDHAP12694 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.15■□□□□ 0.02
BCKDHAP12694 AC097359.3-201ENST00000603982 1210 ntBASIC15.15■□□□□ 0.02
BCKDHAP12694 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BCKDHAP12694 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.15■□□□□ 0.02
BCKDHAP12694 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BCKDHAP12694 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
BCKDHAP12694 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BCKDHAP12694 MST1L-201ENST00000442552 2185 ntBASIC15.15■□□□□ 0.02
BCKDHAP12694 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.15■□□□□ 0.02
BCKDHAP12694 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BCKDHAP12694 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
BCKDHAP12694 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
BCKDHAP12694 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BCKDHAP12694 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 AC067930.6-201ENST00000623257 4947 ntBASIC15.14■□□□□ 0.01
BCKDHAP12694 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
BCKDHAP12694 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
BCKDHAP12694 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.14■□□□□ 0.01
BCKDHAP12694 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 AC063926.3-201ENST00000624734 5658 ntBASIC15.14■□□□□ 0.01
BCKDHAP12694 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.14■□□□□ 0.01
BCKDHAP12694 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.14■□□□□ 0.01
BCKDHAP12694 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.14■□□□□ 0.01
BCKDHAP12694 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
BCKDHAP12694 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.14■□□□□ 0.01
BCKDHAP12694 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
BCKDHAP12694 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 MIR574-201ENST00000385209 96 ntBASIC15.14■□□□□ 0.01
BCKDHAP12694 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.14■□□□□ 0.01
BCKDHAP12694 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.14■□□□□ 0.01
BCKDHAP12694 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.14■□□□□ 0.01
BCKDHAP12694 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.14■□□□□ 0.01
BCKDHAP12694 POLD2P1-201ENST00000511220 997 ntBASIC15.14■□□□□ 0.01
BCKDHAP12694 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 HNRNPUP1-201ENST00000554987 333 ntBASIC15.14■□□□□ 0.01
BCKDHAP12694 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.14■□□□□ 0.01
BCKDHAP12694 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.14■□□□□ 0.01
BCKDHAP12694 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
BCKDHAP12694 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
BCKDHAP12694 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.14■□□□□ 0.01
BCKDHAP12694 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.14■□□□□ 0.01
BCKDHAP12694 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.14■□□□□ 0.01
BCKDHAP12694 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
BCKDHAP12694 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BCKDHAP12694 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
BCKDHAP12694 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms