Protein–RNA interactions for Protein: P0CW27

CCDC166, Coiled-coil domain-containing protein 166, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC166P0CW27 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CCDC166P0CW27 REXO1L1P-202ENST00000608646 1974 ntBASIC15.8■□□□□ 0.12
CCDC166P0CW27 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC166P0CW27 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC166P0CW27 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC166P0CW27 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC166P0CW27 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CCDC166P0CW27 AL136982.4-201ENST00000437689 1740 ntBASIC15.8■□□□□ 0.12
CCDC166P0CW27 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC166P0CW27 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC166P0CW27 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CCDC166P0CW27 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC166P0CW27 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC166P0CW27 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC166P0CW27 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC166P0CW27 MIR346-201ENST00000362234 95 ntBASIC15.8■□□□□ 0.12
CCDC166P0CW27 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.8■□□□□ 0.12
CCDC166P0CW27 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC166P0CW27 MCCD1P2-201ENST00000423228 335 ntBASIC15.8■□□□□ 0.12
CCDC166P0CW27 AC079140.1-201ENST00000508039 487 ntBASIC15.8■□□□□ 0.12
CCDC166P0CW27 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC166P0CW27 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC166P0CW27 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC166P0CW27 LINC01225-203ENST00000563550 1244 ntBASIC15.8■□□□□ 0.12
CCDC166P0CW27 AP000842.3-202ENST00000569238 1080 ntBASIC15.8■□□□□ 0.12
CCDC166P0CW27 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC166P0CW27 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC166P0CW27 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC166P0CW27 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC166P0CW27 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC166P0CW27 AL359258.3-201ENST00000622910 2331 ntBASIC15.8■□□□□ 0.12
CCDC166P0CW27 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC166P0CW27 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC166P0CW27 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC166P0CW27 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC166P0CW27 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC166P0CW27 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC166P0CW27 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC166P0CW27 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC166P0CW27 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC166P0CW27 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC166P0CW27 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC166P0CW27 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC166P0CW27 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC166P0CW27 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC166P0CW27 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC166P0CW27 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC166P0CW27 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC166P0CW27 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 AC023157.3-201ENST00000619086 2088 ntBASIC15.79■□□□□ 0.12
CCDC166P0CW27 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC166P0CW27 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.79■□□□□ 0.12
CCDC166P0CW27 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC166P0CW27 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC166P0CW27 AC004987.2-201ENST00000395959 1148 ntBASIC15.79■□□□□ 0.12
CCDC166P0CW27 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC166P0CW27 IGHV3-62-201ENST00000520057 340 ntBASIC15.79■□□□□ 0.12
CCDC166P0CW27 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC166P0CW27 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC166P0CW27 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC166P0CW27 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC166P0CW27 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC166P0CW27 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC166P0CW27 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC166P0CW27 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC166P0CW27 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC166P0CW27 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC166P0CW27 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CCDC166P0CW27 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CCDC166P0CW27 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC166P0CW27 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CCDC166P0CW27 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC166P0CW27 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC166P0CW27 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC166P0CW27 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
CCDC166P0CW27 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC166P0CW27 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms