Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA12O60330 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA12O60330 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA12O60330 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA12O60330 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA12O60330 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA12O60330 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA12O60330 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA12O60330 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA12O60330 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA12O60330 GGT4P-201ENST00000623672 1708 ntBASIC15.72■□□□□ 0.11
PCDHGA12O60330 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA12O60330 AL513477.1-201ENST00000602865 2407 ntBASIC15.72■□□□□ 0.11
PCDHGA12O60330 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA12O60330 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA12O60330 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA12O60330 KRT43P-201ENST00000434019 910 ntBASIC15.72■□□□□ 0.11
PCDHGA12O60330 HIST3H2BA-201ENST00000436555 524 ntBASIC15.72■□□□□ 0.11
PCDHGA12O60330 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA12O60330 MIR6775-201ENST00000617557 69 ntBASIC15.72■□□□□ 0.11
PCDHGA12O60330 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA12O60330 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA12O60330 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA12O60330 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA12O60330 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA12O60330 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA12O60330 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA12O60330 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA12O60330 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGA12O60330 CLK3P2-201ENST00000427566 1453 ntBASIC15.71■□□□□ 0.11
PCDHGA12O60330 HLA-A-202ENST00000376806 1854 ntBASIC15.71■□□□□ 0.11
PCDHGA12O60330 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA12O60330 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA12O60330 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA12O60330 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA12O60330 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA12O60330 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA12O60330 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA12O60330 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA12O60330 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA12O60330 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA12O60330 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA12O60330 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA12O60330 MIR4321-201ENST00000592276 80 ntBASIC15.71■□□□□ 0.11
PCDHGA12O60330 BTNL10-201ENST00000595971 695 ntBASIC15.71■□□□□ 0.11
PCDHGA12O60330 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA12O60330 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA12O60330 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA12O60330 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA12O60330 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDHGA12O60330 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGA12O60330 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms