Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH4Q99466 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH4Q99466 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH4Q99466 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH4Q99466 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH4Q99466 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH4Q99466 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH4Q99466 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH4Q99466 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NOTCH4Q99466 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NOTCH4Q99466 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
NOTCH4Q99466 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NOTCH4Q99466 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.02■□□□□ 0.16
NOTCH4Q99466 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.02■□□□□ 0.16
NOTCH4Q99466 AC025181.2-201ENST00000606994 802 ntBASIC16.02■□□□□ 0.16
NOTCH4Q99466 AC097724.1-201ENST00000609581 426 ntBASIC16.02■□□□□ 0.16
NOTCH4Q99466 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NOTCH4Q99466 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NOTCH4Q99466 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NOTCH4Q99466 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NOTCH4Q99466 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NOTCH4Q99466 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
NOTCH4Q99466 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NOTCH4Q99466 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
NOTCH4Q99466 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.02■□□□□ 0.16
NOTCH4Q99466 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NOTCH4Q99466 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NOTCH4Q99466 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NOTCH4Q99466 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NOTCH4Q99466 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.02■□□□□ 0.15
NOTCH4Q99466 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.02■□□□□ 0.15
NOTCH4Q99466 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NOTCH4Q99466 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NOTCH4Q99466 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.02■□□□□ 0.15
NOTCH4Q99466 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.02■□□□□ 0.15
NOTCH4Q99466 FAM8A4P-201ENST00000435433 1213 ntBASIC16.02■□□□□ 0.15
NOTCH4Q99466 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
NOTCH4Q99466 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.02■□□□□ 0.15
NOTCH4Q99466 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.02■□□□□ 0.15
NOTCH4Q99466 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
NOTCH4Q99466 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NOTCH4Q99466 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NOTCH4Q99466 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
NOTCH4Q99466 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.02■□□□□ 0.15
NOTCH4Q99466 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NOTCH4Q99466 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
NOTCH4Q99466 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.02■□□□□ 0.15
NOTCH4Q99466 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NOTCH4Q99466 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.02■□□□□ 0.15
NOTCH4Q99466 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
NOTCH4Q99466 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NOTCH4Q99466 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
NOTCH4Q99466 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH4Q99466 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
NOTCH4Q99466 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH4Q99466 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.01■□□□□ 0.15
NOTCH4Q99466 AL023775.1-201ENST00000454907 1746 ntBASIC16.01■□□□□ 0.15
NOTCH4Q99466 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.01■□□□□ 0.15
NOTCH4Q99466 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
NOTCH4Q99466 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH4Q99466 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH4Q99466 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NOTCH4Q99466 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH4Q99466 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH4Q99466 AC104457.1-201ENST00000401024 814 ntBASIC16.01■□□□□ 0.15
NOTCH4Q99466 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NOTCH4Q99466 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.01■□□□□ 0.15
NOTCH4Q99466 AC004898.1-201ENST00000451057 766 ntBASIC16.01■□□□□ 0.15
NOTCH4Q99466 AC004066.1-201ENST00000502488 802 ntBASIC16.01■□□□□ 0.15
NOTCH4Q99466 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.01■□□□□ 0.15
NOTCH4Q99466 CHMP4BP1-201ENST00000556017 588 ntBASIC16.01■□□□□ 0.15
NOTCH4Q99466 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
NOTCH4Q99466 EEF1DP1-201ENST00000585891 896 ntBASIC16.01■□□□□ 0.15
NOTCH4Q99466 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.01■□□□□ 0.15
NOTCH4Q99466 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH4Q99466 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.01■□□□□ 0.15
NOTCH4Q99466 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.01■□□□□ 0.15
NOTCH4Q99466 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
NOTCH4Q99466 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
NOTCH4Q99466 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH4Q99466 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.01■□□□□ 0.15
NOTCH4Q99466 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH4Q99466 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
NOTCH4Q99466 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH4Q99466 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH4Q99466 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH4Q99466 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH4Q99466 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
NOTCH4Q99466 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH4Q99466 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NOTCH4Q99466 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
NOTCH4Q99466 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms