Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BEST4Q8NFU0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.79□□□□□ -0.2
BEST4Q8NFU0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.79□□□□□ -0.2
BEST4Q8NFU0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BEST4Q8NFU0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.79□□□□□ -0.2
BEST4Q8NFU0 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
BEST4Q8NFU0 AC112693.3-201ENST00000624819 1983 ntBASIC13.79□□□□□ -0.2
BEST4Q8NFU0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
BEST4Q8NFU0 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BEST4Q8NFU0 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
BEST4Q8NFU0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.79□□□□□ -0.2
BEST4Q8NFU0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BEST4Q8NFU0 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BEST4Q8NFU0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.79□□□□□ -0.2
BEST4Q8NFU0 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BEST4Q8NFU0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
BEST4Q8NFU0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
BEST4Q8NFU0 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BEST4Q8NFU0 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BEST4Q8NFU0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
BEST4Q8NFU0 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
BEST4Q8NFU0 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BEST4Q8NFU0 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BEST4Q8NFU0 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
BEST4Q8NFU0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 ARMC10P1-201ENST00000313754 855 ntBASIC13.78□□□□□ -0.2
BEST4Q8NFU0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 NPAP1P7-201ENST00000613027 823 ntBASIC13.78□□□□□ -0.2
BEST4Q8NFU0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 AL805961.1-202ENST00000641562 540 ntBASIC13.78□□□□□ -0.2
BEST4Q8NFU0 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BEST4Q8NFU0 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
BEST4Q8NFU0 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
BEST4Q8NFU0 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
BEST4Q8NFU0 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
BEST4Q8NFU0 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
BEST4Q8NFU0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
BEST4Q8NFU0 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.2
BEST4Q8NFU0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms