Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.4■□□□□ 0.38
KCNA1Q09470 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.4■□□□□ 0.38
KCNA1Q09470 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNA1Q09470 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNA1Q09470 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.4■□□□□ 0.38
KCNA1Q09470 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.4■□□□□ 0.38
KCNA1Q09470 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.4■□□□□ 0.38
KCNA1Q09470 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNA1Q09470 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNA1Q09470 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNA1Q09470 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNA1Q09470 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNA1Q09470 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KCNA1Q09470 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KCNA1Q09470 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.4■□□□□ 0.38
KCNA1Q09470 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNA1Q09470 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.4■□□□□ 0.38
KCNA1Q09470 MRPS18AP1-201ENST00000414458 589 ntBASIC17.4■□□□□ 0.38
KCNA1Q09470 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.4■□□□□ 0.38
KCNA1Q09470 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.4■□□□□ 0.38
KCNA1Q09470 SERBP1P3-201ENST00000459980 809 ntBASIC17.4■□□□□ 0.38
KCNA1Q09470 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.4■□□□□ 0.38
KCNA1Q09470 AC093214.1-201ENST00000511688 1107 ntBASIC17.4■□□□□ 0.38
KCNA1Q09470 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KCNA1Q09470 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KCNA1Q09470 LINC01115-203ENST00000606068 577 ntBASIC17.4■□□□□ 0.38
KCNA1Q09470 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.4■□□□□ 0.38
KCNA1Q09470 AF228730.6-201ENST00000641497 218 ntBASIC17.4■□□□□ 0.38
KCNA1Q09470 AC084121.3-201ENST00000641716 218 ntBASIC17.4■□□□□ 0.38
KCNA1Q09470 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
KCNA1Q09470 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNA1Q09470 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KCNA1Q09470 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.4■□□□□ 0.38
KCNA1Q09470 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNA1Q09470 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNA1Q09470 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNA1Q09470 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KCNA1Q09470 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.4■□□□□ 0.38
KCNA1Q09470 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.4■□□□□ 0.38
KCNA1Q09470 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
KCNA1Q09470 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KCNA1Q09470 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KCNA1Q09470 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.4■□□□□ 0.38
KCNA1Q09470 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
KCNA1Q09470 Z97205.2-201ENST00000564697 1639 ntBASIC17.39■□□□□ 0.38
KCNA1Q09470 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.39■□□□□ 0.38
KCNA1Q09470 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KCNA1Q09470 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KCNA1Q09470 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KCNA1Q09470 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNA1Q09470 AC090616.6-203ENST00000579186 1945 ntBASIC17.39■□□□□ 0.37
KCNA1Q09470 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
KCNA1Q09470 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNA1Q09470 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KCNA1Q09470 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.39■□□□□ 0.37
KCNA1Q09470 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.39■□□□□ 0.37
KCNA1Q09470 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
KCNA1Q09470 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.39■□□□□ 0.37
KCNA1Q09470 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
KCNA1Q09470 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNA1Q09470 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.39■□□□□ 0.37
KCNA1Q09470 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNA1Q09470 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNA1Q09470 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNA1Q09470 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNA1Q09470 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KCNA1Q09470 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
KCNA1Q09470 UGT1A2P-201ENST00000454886 866 ntBASIC17.39■□□□□ 0.37
KCNA1Q09470 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNA1Q09470 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.39■□□□□ 0.37
KCNA1Q09470 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
KCNA1Q09470 AC008738.7-201ENST00000609744 511 ntBASIC17.39■□□□□ 0.37
KCNA1Q09470 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
KCNA1Q09470 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNA1Q09470 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.39■□□□□ 0.37
KCNA1Q09470 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.39■□□□□ 0.37
KCNA1Q09470 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNA1Q09470 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
KCNA1Q09470 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.39■□□□□ 0.37
KCNA1Q09470 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNA1Q09470 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNA1Q09470 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KCNA1Q09470 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNA1Q09470 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KCNA1Q09470 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KCNA1Q09470 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNA1Q09470 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNA1Q09470 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNA1Q09470 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KCNA1Q09470 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
KCNA1Q09470 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNA1Q09470 LINC00554-201ENST00000564841 3011 ntBASIC17.38■□□□□ 0.37
KCNA1Q09470 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNA1Q09470 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KCNA1Q09470 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KCNA1Q09470 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KCNA1Q09470 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.38■□□□□ 0.37
KCNA1Q09470 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
KCNA1Q09470 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.38■□□□□ 0.37
KCNA1Q09470 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms