Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 KRT8P12-202ENST00000472924 1397 ntBASIC20.45■□□□□ 0.86
PDZRN3Q9UPQ7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 PRAL-201ENST00000624952 3286 ntBASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 RN7SL837P-201ENST00000463010 287 ntBASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 AL033527.5-202ENST00000641632 1098 ntBASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC20.44■□□□□ 0.86
PDZRN3Q9UPQ7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 AC004790.1-201ENST00000612686 536 ntBASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDZRN3Q9UPQ7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 MIR648-201ENST00000385046 94 ntBASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PDZRN3Q9UPQ7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms