Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 PRORSD1P-201ENST00000295112 541 ntBASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 GCSHP5-201ENST00000443090 522 ntBASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 AL158047.1-201ENST00000445918 881 ntBASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 AC112907.2-201ENST00000448639 330 ntBASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 AC090192.1-201ENST00000517740 490 ntBASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 AC005412.3-201ENST00000580309 715 ntBASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 AC064862.7-201ENST00000604520 867 ntBASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 AL365330.1-201ENST00000607459 531 ntBASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLIRPQ9GZT3 LINC01568-207ENST00000641790 1380 ntBASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 PTENP1-202ENST00000532280 3996 ntBASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 AC093724.1-201ENST00000448659 1027 ntBASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 PRYP5-201ENST00000451909 266 ntBASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLIRPQ9GZT3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 CR383656.2-201ENST00000548656 2254 ntBASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms