Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 RN7SL828P-201ENST00000607615 303 ntBASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 AC006538.3-201ENST00000612495 578 ntBASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 AJ011931.1-201ENST00000618749 2492 ntBASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO3Q9BXY4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 AL645939.2-201ENST00000427340 991 ntBASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 RBPMS2P1-201ENST00000437762 623 ntBASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 AC010327.4-202ENST00000591484 748 ntBASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 AC026979.3-201ENST00000607315 403 ntBASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
RSPO3Q9BXY4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.51□□□□□ -0.09
RSPO3Q9BXY4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RSPO3Q9BXY4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RSPO3Q9BXY4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RSPO3Q9BXY4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.51□□□□□ -0.09
RSPO3Q9BXY4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.51□□□□□ -0.09
RSPO3Q9BXY4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RSPO3Q9BXY4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RSPO3Q9BXY4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RSPO3Q9BXY4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.51□□□□□ -0.09
RSPO3Q9BXY4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RSPO3Q9BXY4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
RSPO3Q9BXY4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RSPO3Q9BXY4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RSPO3Q9BXY4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RSPO3Q9BXY4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RSPO3Q9BXY4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RSPO3Q9BXY4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RSPO3Q9BXY4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms