Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB40CQ96S21 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RAB40CQ96S21 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB40CQ96S21 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB40CQ96S21 DFFB-203ENST00000341385 572 ntTSL 5 BASIC12.94□□□□□ -0.34
RAB40CQ96S21 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB40CQ96S21 LAGE3P1-201ENST00000425356 484 ntBASIC12.94□□□□□ -0.34
RAB40CQ96S21 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.94□□□□□ -0.34
RAB40CQ96S21 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.94□□□□□ -0.34
RAB40CQ96S21 MIR4321-201ENST00000592276 80 ntBASIC12.94□□□□□ -0.34
RAB40CQ96S21 CLEC4GP1-201ENST00000596555 870 ntBASIC12.94□□□□□ -0.34
RAB40CQ96S21 AL355877.3-201ENST00000622820 899 ntBASIC12.94□□□□□ -0.34
RAB40CQ96S21 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB40CQ96S21 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.94□□□□□ -0.34
RAB40CQ96S21 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB40CQ96S21 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB40CQ96S21 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RAB40CQ96S21 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
RAB40CQ96S21 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB40CQ96S21 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB40CQ96S21 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB40CQ96S21 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB40CQ96S21 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.94□□□□□ -0.34
RAB40CQ96S21 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB40CQ96S21 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB40CQ96S21 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB40CQ96S21 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB40CQ96S21 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RAB40CQ96S21 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.94□□□□□ -0.34
RAB40CQ96S21 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB40CQ96S21 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB40CQ96S21 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB40CQ96S21 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB40CQ96S21 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB40CQ96S21 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB40CQ96S21 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB40CQ96S21 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB40CQ96S21 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB40CQ96S21 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB40CQ96S21 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB40CQ96S21 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB40CQ96S21 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB40CQ96S21 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 SCARNA2-201ENST00000458748 420 ntBASIC12.93□□□□□ -0.34
RAB40CQ96S21 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB40CQ96S21 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB40CQ96S21 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB40CQ96S21 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB40CQ96S21 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB40CQ96S21 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB40CQ96S21 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
RAB40CQ96S21 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB40CQ96S21 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB40CQ96S21 FGD5P1-202ENST00000614866 2498 ntBASIC12.93□□□□□ -0.34
RAB40CQ96S21 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms