Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.82□□□□□ -0.04
CD47Q08722 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CD47Q08722 CXCL1P1-201ENST00000502804 216 ntBASIC14.82□□□□□ -0.04
CD47Q08722 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CD47Q08722 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.82□□□□□ -0.04
CD47Q08722 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.82□□□□□ -0.04
CD47Q08722 UNC93B6-202ENST00000528242 690 ntBASIC14.82□□□□□ -0.04
CD47Q08722 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.82□□□□□ -0.04
CD47Q08722 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.82□□□□□ -0.04
CD47Q08722 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.82□□□□□ -0.04
CD47Q08722 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.82□□□□□ -0.04
CD47Q08722 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.82□□□□□ -0.04
CD47Q08722 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CD47Q08722 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.82□□□□□ -0.04
CD47Q08722 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.82□□□□□ -0.04
CD47Q08722 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.82□□□□□ -0.04
CD47Q08722 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CD47Q08722 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CD47Q08722 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CD47Q08722 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.82□□□□□ -0.04
CD47Q08722 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CD47Q08722 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CD47Q08722 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.82□□□□□ -0.04
CD47Q08722 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CD47Q08722 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CD47Q08722 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.81□□□□□ -0.04
CD47Q08722 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.81□□□□□ -0.04
CD47Q08722 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CD47Q08722 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CD47Q08722 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CD47Q08722 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.81□□□□□ -0.04
CD47Q08722 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.81□□□□□ -0.04
CD47Q08722 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CD47Q08722 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.81□□□□□ -0.04
CD47Q08722 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.81□□□□□ -0.04
CD47Q08722 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
CD47Q08722 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.81□□□□□ -0.04
CD47Q08722 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 HAUS4P1-201ENST00000406739 1145 ntBASIC14.81□□□□□ -0.04
CD47Q08722 CRYGEP-201ENST00000412192 528 ntBASIC14.81□□□□□ -0.04
CD47Q08722 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.81□□□□□ -0.04
CD47Q08722 AL513480.1-201ENST00000451731 511 ntBASIC14.81□□□□□ -0.04
CD47Q08722 AC009078.2-202ENST00000463353 338 ntBASIC14.81□□□□□ -0.04
CD47Q08722 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CD47Q08722 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.81□□□□□ -0.04
CD47Q08722 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.81□□□□□ -0.04
CD47Q08722 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 SLC25A6P4-201ENST00000586535 553 ntBASIC14.81□□□□□ -0.04
CD47Q08722 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 ACTL9-202ENST00000612068 1252 ntBASIC14.81□□□□□ -0.04
CD47Q08722 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.81□□□□□ -0.04
CD47Q08722 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.81□□□□□ -0.04
CD47Q08722 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.81□□□□□ -0.04
CD47Q08722 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.81□□□□□ -0.04
CD47Q08722 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.81□□□□□ -0.04
CD47Q08722 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CD47Q08722 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.81□□□□□ -0.04
CD47Q08722 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CD47Q08722 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CD47Q08722 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CD47Q08722 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.81□□□□□ -0.04
CD47Q08722 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD47Q08722 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms