Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.95■□□□□ 0.3
CDR2Q01850 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.95■□□□□ 0.3
CDR2Q01850 AC092865.5-201ENST00000545435 363 ntBASIC16.95■□□□□ 0.3
CDR2Q01850 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.95■□□□□ 0.3
CDR2Q01850 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.95■□□□□ 0.3
CDR2Q01850 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDR2Q01850 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.95■□□□□ 0.3
CDR2Q01850 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDR2Q01850 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.95■□□□□ 0.3
CDR2Q01850 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.95■□□□□ 0.3
CDR2Q01850 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDR2Q01850 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDR2Q01850 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDR2Q01850 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDR2Q01850 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDR2Q01850 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CDR2Q01850 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.95■□□□□ 0.3
CDR2Q01850 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDR2Q01850 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.94■□□□□ 0.3
CDR2Q01850 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.94■□□□□ 0.3
CDR2Q01850 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
CDR2Q01850 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CDR2Q01850 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDR2Q01850 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDR2Q01850 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CDR2Q01850 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDR2Q01850 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.94■□□□□ 0.3
CDR2Q01850 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDR2Q01850 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDR2Q01850 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDR2Q01850 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CDR2Q01850 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CDR2Q01850 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
CDR2Q01850 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.94■□□□□ 0.3
CDR2Q01850 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDR2Q01850 AC254562.1-201ENST00000417586 456 ntBASIC16.94■□□□□ 0.3
CDR2Q01850 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDR2Q01850 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDR2Q01850 HNRNPUP1-201ENST00000554987 333 ntBASIC16.94■□□□□ 0.3
CDR2Q01850 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.94■□□□□ 0.3
CDR2Q01850 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.94■□□□□ 0.3
CDR2Q01850 AC097359.3-201ENST00000603982 1210 ntBASIC16.94■□□□□ 0.3
CDR2Q01850 AC003101.2-201ENST00000612557 442 ntBASIC16.94■□□□□ 0.3
CDR2Q01850 AC007967.4-201ENST00000614700 386 ntBASIC16.94■□□□□ 0.3
CDR2Q01850 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDR2Q01850 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.94■□□□□ 0.3
CDR2Q01850 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDR2Q01850 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDR2Q01850 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDR2Q01850 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDR2Q01850 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.94■□□□□ 0.3
CDR2Q01850 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDR2Q01850 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDR2Q01850 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDR2Q01850 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDR2Q01850 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDR2Q01850 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDR2Q01850 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDR2Q01850 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDR2Q01850 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDR2Q01850 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.93■□□□□ 0.3
CDR2Q01850 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDR2Q01850 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDR2Q01850 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDR2Q01850 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDR2Q01850 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CDR2Q01850 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDR2Q01850 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDR2Q01850 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDR2Q01850 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDR2Q01850 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.93■□□□□ 0.3
CDR2Q01850 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CDR2Q01850 AZGP1P1-201ENST00000411909 902 ntBASIC16.93■□□□□ 0.3
CDR2Q01850 SPDYE17-201ENST00000412399 783 ntBASIC16.93■□□□□ 0.3
CDR2Q01850 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDR2Q01850 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.93■□□□□ 0.3
CDR2Q01850 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.93■□□□□ 0.3
CDR2Q01850 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.93■□□□□ 0.3
CDR2Q01850 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDR2Q01850 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.93■□□□□ 0.3
CDR2Q01850 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.93■□□□□ 0.3
CDR2Q01850 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.93■□□□□ 0.3
CDR2Q01850 AL133215.2-201ENST00000609242 977 ntBASIC16.93■□□□□ 0.3
CDR2Q01850 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDR2Q01850 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDR2Q01850 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.93■□□□□ 0.3
CDR2Q01850 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDR2Q01850 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDR2Q01850 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDR2Q01850 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.93■□□□□ 0.3
CDR2Q01850 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDR2Q01850 AC009090.5-201ENST00000624886 2285 ntBASIC16.93■□□□□ 0.3
CDR2Q01850 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.93■□□□□ 0.3
CDR2Q01850 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.92■□□□□ 0.3
CDR2Q01850 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDR2Q01850 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDR2Q01850 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDR2Q01850 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDR2Q01850 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.92■□□□□ 0.3
CDR2Q01850 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms