Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.35□□□□□ -0.11
RPS4XP62701 AC026979.3-201ENST00000607315 403 ntBASIC14.35□□□□□ -0.11
RPS4XP62701 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RPS4XP62701 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS4XP62701 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.35□□□□□ -0.11
RPS4XP62701 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS4XP62701 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.35□□□□□ -0.11
RPS4XP62701 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS4XP62701 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RPS4XP62701 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RPS4XP62701 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS4XP62701 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS4XP62701 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS4XP62701 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS4XP62701 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS4XP62701 AC009090.5-201ENST00000624886 2285 ntBASIC14.35□□□□□ -0.11
RPS4XP62701 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPS4XP62701 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPS4XP62701 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS4XP62701 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RPS4XP62701 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS4XP62701 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RPS4XP62701 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RPS4XP62701 AP3S2-216ENST00000617003 1561 ntBASIC14.34□□□□□ -0.11
RPS4XP62701 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
RPS4XP62701 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.34□□□□□ -0.11
RPS4XP62701 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.34□□□□□ -0.11
RPS4XP62701 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.34□□□□□ -0.11
RPS4XP62701 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.34□□□□□ -0.11
RPS4XP62701 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 MIR943-201ENST00000401286 94 ntBASIC14.34□□□□□ -0.11
RPS4XP62701 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 AC107890.1-201ENST00000422478 521 ntBASIC14.34□□□□□ -0.11
RPS4XP62701 FAM58DP-201ENST00000428076 619 ntBASIC14.34□□□□□ -0.11
RPS4XP62701 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.34□□□□□ -0.11
RPS4XP62701 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.34□□□□□ -0.11
RPS4XP62701 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.34□□□□□ -0.11
RPS4XP62701 AC051619.7-201ENST00000568314 623 ntBASIC14.34□□□□□ -0.11
RPS4XP62701 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.34□□□□□ -0.11
RPS4XP62701 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.34□□□□□ -0.11
RPS4XP62701 AL450472.2-201ENST00000603663 1156 ntBASIC14.34□□□□□ -0.11
RPS4XP62701 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.34□□□□□ -0.11
RPS4XP62701 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.34□□□□□ -0.11
RPS4XP62701 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.34□□□□□ -0.11
RPS4XP62701 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
RPS4XP62701 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RPS4XP62701 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.34□□□□□ -0.11
RPS4XP62701 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.34□□□□□ -0.11
RPS4XP62701 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RPS4XP62701 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.34□□□□□ -0.11
RPS4XP62701 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RPS4XP62701 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPS4XP62701 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.34□□□□□ -0.11
RPS4XP62701 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RPS4XP62701 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
RPS4XP62701 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.33□□□□□ -0.11
RPS4XP62701 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
RPS4XP62701 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
RPS4XP62701 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RPS4XP62701 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RPS4XP62701 AC112693.3-201ENST00000624819 1983 ntBASIC14.33□□□□□ -0.12
RPS4XP62701 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RPS4XP62701 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.33□□□□□ -0.12
RPS4XP62701 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.33□□□□□ -0.12
RPS4XP62701 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms