Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PER3P56645 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.78□□□□□ -0.04
PER3P56645 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.78□□□□□ -0.04
PER3P56645 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.78□□□□□ -0.04
PER3P56645 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
PER3P56645 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.78□□□□□ -0.04
PER3P56645 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PER3P56645 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PER3P56645 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.78□□□□□ -0.04
PER3P56645 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
PER3P56645 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PER3P56645 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PER3P56645 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PER3P56645 DFFBP1-201ENST00000433250 979 ntBASIC14.78□□□□□ -0.04
PER3P56645 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.78□□□□□ -0.04
PER3P56645 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.78□□□□□ -0.04
PER3P56645 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.78□□□□□ -0.04
PER3P56645 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.78□□□□□ -0.04
PER3P56645 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PER3P56645 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.77□□□□□ -0.04
PER3P56645 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.77□□□□□ -0.04
PER3P56645 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.77□□□□□ -0.04
PER3P56645 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.77□□□□□ -0.04
PER3P56645 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PER3P56645 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PER3P56645 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PER3P56645 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PER3P56645 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PER3P56645 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PER3P56645 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PER3P56645 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.77□□□□□ -0.04
PER3P56645 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
PER3P56645 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PER3P56645 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PER3P56645 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PER3P56645 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.77□□□□□ -0.04
PER3P56645 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
PER3P56645 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
PER3P56645 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
PER3P56645 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PER3P56645 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PER3P56645 AC142381.1-201ENST00000426099 345 ntBASIC14.77□□□□□ -0.05
PER3P56645 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.77□□□□□ -0.05
PER3P56645 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.77□□□□□ -0.05
PER3P56645 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.77□□□□□ -0.05
PER3P56645 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.77□□□□□ -0.05
PER3P56645 RN7SL752P-201ENST00000463779 287 ntBASIC14.77□□□□□ -0.05
PER3P56645 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.77□□□□□ -0.05
PER3P56645 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.77□□□□□ -0.05
PER3P56645 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.77□□□□□ -0.05
PER3P56645 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PER3P56645 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.77□□□□□ -0.05
PER3P56645 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.77□□□□□ -0.05
PER3P56645 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.77□□□□□ -0.05
PER3P56645 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.77□□□□□ -0.05
PER3P56645 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.77□□□□□ -0.05
PER3P56645 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PER3P56645 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PER3P56645 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
PER3P56645 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.77□□□□□ -0.05
PER3P56645 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PER3P56645 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.77□□□□□ -0.05
PER3P56645 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PER3P56645 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PER3P56645 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PER3P56645 AC006277.1-201ENST00000624348 1610 ntBASIC14.77□□□□□ -0.05
PER3P56645 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.77□□□□□ -0.05
PER3P56645 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.77□□□□□ -0.05
PER3P56645 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.77□□□□□ -0.05
PER3P56645 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PER3P56645 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PER3P56645 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.77□□□□□ -0.05
PER3P56645 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms