Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S2P56377 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.46■□□□□ 0.07
AP1S2P56377 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S2P56377 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S2P56377 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S2P56377 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S2P56377 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S2P56377 AL139400.1-201ENST00000366220 510 ntBASIC15.46■□□□□ 0.07
AP1S2P56377 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S2P56377 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.46■□□□□ 0.07
AP1S2P56377 HIST3H2BA-201ENST00000436555 524 ntBASIC15.46■□□□□ 0.07
AP1S2P56377 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S2P56377 HLA-V-204ENST00000476601 1289 ntBASIC15.46■□□□□ 0.07
AP1S2P56377 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.46■□□□□ 0.07
AP1S2P56377 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.46■□□□□ 0.07
AP1S2P56377 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.46■□□□□ 0.07
AP1S2P56377 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.46■□□□□ 0.07
AP1S2P56377 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S2P56377 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.46■□□□□ 0.07
AP1S2P56377 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.46■□□□□ 0.07
AP1S2P56377 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.46■□□□□ 0.07
AP1S2P56377 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.46■□□□□ 0.07
AP1S2P56377 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.46■□□□□ 0.07
AP1S2P56377 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S2P56377 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
AP1S2P56377 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.46■□□□□ 0.07
AP1S2P56377 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.46■□□□□ 0.07
AP1S2P56377 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.46■□□□□ 0.07
AP1S2P56377 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.46■□□□□ 0.07
AP1S2P56377 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S2P56377 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S2P56377 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.46■□□□□ 0.06
AP1S2P56377 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
AP1S2P56377 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.46■□□□□ 0.06
AP1S2P56377 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
AP1S2P56377 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
AP1S2P56377 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
AP1S2P56377 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
AP1S2P56377 TMBIM7P-203ENST00000641617 1718 ntBASIC15.46■□□□□ 0.06
AP1S2P56377 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
AP1S2P56377 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S2P56377 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S2P56377 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.45■□□□□ 0.06
AP1S2P56377 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S2P56377 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
AP1S2P56377 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S2P56377 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.45■□□□□ 0.06
AP1S2P56377 AC105250.1-201ENST00000509378 2057 ntBASIC15.45■□□□□ 0.06
AP1S2P56377 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S2P56377 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S2P56377 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.45■□□□□ 0.06
AP1S2P56377 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
AP1S2P56377 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.45■□□□□ 0.06
AP1S2P56377 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S2P56377 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S2P56377 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S2P56377 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.45■□□□□ 0.06
AP1S2P56377 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S2P56377 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
AP1S2P56377 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
AP1S2P56377 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
AP1S2P56377 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
AP1S2P56377 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S2P56377 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.45■□□□□ 0.06
AP1S2P56377 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.45■□□□□ 0.06
AP1S2P56377 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.45■□□□□ 0.06
AP1S2P56377 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.45■□□□□ 0.06
AP1S2P56377 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S2P56377 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.45■□□□□ 0.06
AP1S2P56377 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.45■□□□□ 0.06
AP1S2P56377 MIR6069-201ENST00000620069 79 ntBASIC15.45■□□□□ 0.06
AP1S2P56377 Z92544.3-201ENST00000624747 417 ntBASIC15.45■□□□□ 0.06
AP1S2P56377 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.45■□□□□ 0.06
AP1S2P56377 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
AP1S2P56377 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S2P56377 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S2P56377 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S2P56377 AC092850.2-201ENST00000623821 2697 ntBASIC15.45■□□□□ 0.06
AP1S2P56377 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S2P56377 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S2P56377 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S2P56377 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S2P56377 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP1S2P56377 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
AP1S2P56377 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
AP1S2P56377 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
AP1S2P56377 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
AP1S2P56377 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.44■□□□□ 0.06
AP1S2P56377 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
AP1S2P56377 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
AP1S2P56377 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.44■□□□□ 0.06
AP1S2P56377 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
AP1S2P56377 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
AP1S2P56377 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.44■□□□□ 0.06
AP1S2P56377 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
AP1S2P56377 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.44■□□□□ 0.06
AP1S2P56377 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
AP1S2P56377 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.44■□□□□ 0.06
AP1S2P56377 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
AP1S2P56377 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms