Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CCL3L1P16619 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL3L1P16619 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL3L1P16619 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL3L1P16619 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL3L1P16619 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL3L1P16619 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL3L1P16619 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL3L1P16619 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL3L1P16619 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL3L1P16619 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCL3L1P16619 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CCL3L1P16619 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL3L1P16619 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCL3L1P16619 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
CCL3L1P16619 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL3L1P16619 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CCL3L1P16619 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL3L1P16619 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL3L1P16619 FO393414.2-201ENST00000405153 598 ntBASIC13.11□□□□□ -0.31
CCL3L1P16619 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL3L1P16619 AC241585.1-201ENST00000433527 519 ntBASIC13.11□□□□□ -0.31
CCL3L1P16619 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
CCL3L1P16619 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL3L1P16619 RN7SL618P-201ENST00000477850 296 ntBASIC13.11□□□□□ -0.31
CCL3L1P16619 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL3L1P16619 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL3L1P16619 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL3L1P16619 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.11□□□□□ -0.31
CCL3L1P16619 MIR6069-201ENST00000620069 79 ntBASIC13.11□□□□□ -0.31
CCL3L1P16619 AL590560.3-201ENST00000623350 461 ntBASIC13.11□□□□□ -0.31
CCL3L1P16619 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL3L1P16619 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL3L1P16619 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL3L1P16619 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL3L1P16619 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL3L1P16619 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL3L1P16619 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL3L1P16619 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CCL3L1P16619 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL3L1P16619 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL3L1P16619 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL3L1P16619 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL3L1P16619 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL3L1P16619 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL3L1P16619 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL3L1P16619 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL3L1P16619 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CCL3L1P16619 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CCL3L1P16619 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL3L1P16619 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CCL3L1P16619 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
CCL3L1P16619 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL3L1P16619 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL3L1P16619 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL3L1P16619 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL3L1P16619 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL3L1P16619 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL3L1P16619 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CCL3L1P16619 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL3L1P16619 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL3L1P16619 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL3L1P16619 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL3L1P16619 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CCL3L1P16619 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL3L1P16619 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL3L1P16619 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL3L1P16619 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CCL3L1P16619 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.1□□□□□ -0.31
CCL3L1P16619 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL3L1P16619 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL3L1P16619 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.1□□□□□ -0.31
CCL3L1P16619 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.1□□□□□ -0.31
CCL3L1P16619 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL3L1P16619 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL3L1P16619 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL3L1P16619 HNRNPUP1-201ENST00000554987 333 ntBASIC13.1□□□□□ -0.31
CCL3L1P16619 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.1□□□□□ -0.31
CCL3L1P16619 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms