Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 AP002383.4-201ENST00000442518 975 ntBASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 AC245100.5-201ENST00000452108 331 ntBASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 AL805961.1-202ENST00000641562 540 ntBASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KCNIP3Q9Y2W7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 CICP24-201ENST00000605464 2705 ntBASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 SNX18-202ENST00000343017 3140 ntBASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms