Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EBF1Q9UH73 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EBF1Q9UH73 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
EBF1Q9UH73 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
EBF1Q9UH73 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.21■□□□□ 0.19
EBF1Q9UH73 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.21■□□□□ 0.19
EBF1Q9UH73 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.21■□□□□ 0.19
EBF1Q9UH73 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.21■□□□□ 0.19
EBF1Q9UH73 MIR6775-201ENST00000617557 69 ntBASIC16.21■□□□□ 0.19
EBF1Q9UH73 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.21■□□□□ 0.19
EBF1Q9UH73 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
EBF1Q9UH73 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.21■□□□□ 0.19
EBF1Q9UH73 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.21■□□□□ 0.19
EBF1Q9UH73 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EBF1Q9UH73 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
EBF1Q9UH73 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
EBF1Q9UH73 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.21■□□□□ 0.19
EBF1Q9UH73 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
EBF1Q9UH73 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EBF1Q9UH73 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.21■□□□□ 0.19
EBF1Q9UH73 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.21■□□□□ 0.19
EBF1Q9UH73 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
EBF1Q9UH73 DBET-201ENST00000630918 3363 ntBASIC16.21■□□□□ 0.18
EBF1Q9UH73 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
EBF1Q9UH73 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
EBF1Q9UH73 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
EBF1Q9UH73 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.21■□□□□ 0.18
EBF1Q9UH73 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
EBF1Q9UH73 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
EBF1Q9UH73 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.21■□□□□ 0.18
EBF1Q9UH73 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
EBF1Q9UH73 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.2■□□□□ 0.18
EBF1Q9UH73 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
EBF1Q9UH73 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.2■□□□□ 0.18
EBF1Q9UH73 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
EBF1Q9UH73 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 AL136982.4-201ENST00000437689 1740 ntBASIC16.2■□□□□ 0.18
EBF1Q9UH73 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.2■□□□□ 0.18
EBF1Q9UH73 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
EBF1Q9UH73 HIST3H2BA-201ENST00000436555 524 ntBASIC16.2■□□□□ 0.18
EBF1Q9UH73 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.2■□□□□ 0.18
EBF1Q9UH73 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.2■□□□□ 0.18
EBF1Q9UH73 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.2■□□□□ 0.18
EBF1Q9UH73 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.2■□□□□ 0.18
EBF1Q9UH73 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.2■□□□□ 0.18
EBF1Q9UH73 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.2■□□□□ 0.18
EBF1Q9UH73 AC092552.1-201ENST00000547243 906 ntBASIC16.2■□□□□ 0.18
EBF1Q9UH73 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.2■□□□□ 0.18
EBF1Q9UH73 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.2■□□□□ 0.18
EBF1Q9UH73 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.2■□□□□ 0.18
EBF1Q9UH73 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
EBF1Q9UH73 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.2■□□□□ 0.18
EBF1Q9UH73 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
EBF1Q9UH73 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EBF1Q9UH73 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.19■□□□□ 0.18
EBF1Q9UH73 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
EBF1Q9UH73 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.19■□□□□ 0.18
EBF1Q9UH73 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EBF1Q9UH73 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EBF1Q9UH73 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
EBF1Q9UH73 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
EBF1Q9UH73 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EBF1Q9UH73 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
EBF1Q9UH73 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EBF1Q9UH73 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
EBF1Q9UH73 U82695.1-201ENST00000635752 1889 ntBASIC16.19■□□□□ 0.18
EBF1Q9UH73 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
EBF1Q9UH73 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EBF1Q9UH73 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.19■□□□□ 0.18
EBF1Q9UH73 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
EBF1Q9UH73 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
EBF1Q9UH73 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.19■□□□□ 0.18
EBF1Q9UH73 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.19■□□□□ 0.18
EBF1Q9UH73 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.19■□□□□ 0.18
EBF1Q9UH73 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.19■□□□□ 0.18
EBF1Q9UH73 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.19■□□□□ 0.18
EBF1Q9UH73 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms