Protein–RNA interactions for Protein: Q9P2J3

KLHL9, Kelch-like protein 9, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL9Q9P2J3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
KLHL9Q9P2J3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KLHL9Q9P2J3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KLHL9Q9P2J3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
KLHL9Q9P2J3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
KLHL9Q9P2J3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 AL645939.2-201ENST00000427340 991 ntBASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 AL353705.2-201ENST00000428243 662 ntBASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 AC015911.4-201ENST00000588022 1070 ntBASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 AC018529.1-201ENST00000613063 361 ntBASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KLHL9Q9P2J3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
KLHL9Q9P2J3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KLHL9Q9P2J3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KLHL9Q9P2J3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
KLHL9Q9P2J3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
KLHL9Q9P2J3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
KLHL9Q9P2J3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.52□□□□□ -0.08
KLHL9Q9P2J3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
KLHL9Q9P2J3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
KLHL9Q9P2J3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
KLHL9Q9P2J3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KLHL9Q9P2J3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.52□□□□□ -0.08
KLHL9Q9P2J3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
KLHL9Q9P2J3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.52□□□□□ -0.09
KLHL9Q9P2J3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.52□□□□□ -0.09
KLHL9Q9P2J3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
KLHL9Q9P2J3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.52□□□□□ -0.09
KLHL9Q9P2J3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
KLHL9Q9P2J3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.52□□□□□ -0.09
KLHL9Q9P2J3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.52□□□□□ -0.09
KLHL9Q9P2J3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.52□□□□□ -0.09
KLHL9Q9P2J3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.52□□□□□ -0.09
KLHL9Q9P2J3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
KLHL9Q9P2J3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.52□□□□□ -0.09
KLHL9Q9P2J3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.52□□□□□ -0.09
KLHL9Q9P2J3 Z92544.3-201ENST00000624747 417 ntBASIC14.52□□□□□ -0.09
KLHL9Q9P2J3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.52□□□□□ -0.09
KLHL9Q9P2J3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
KLHL9Q9P2J3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
KLHL9Q9P2J3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
KLHL9Q9P2J3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms