Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 AC092364.2-201ENST00000596710 2692 ntBASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TM9SF3Q9HD45 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 TMEM14DP-201ENST00000422205 345 ntBASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 AC022210.1-201ENST00000449856 793 ntBASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 TMEM261P1-201ENST00000604899 340 ntBASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TM9SF3Q9HD45 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
TM9SF3Q9HD45 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 AC007389.4-201ENST00000454674 793 ntBASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 RARRES2P5-201ENST00000564013 466 ntBASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF3Q9HD45 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms