Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 AC109322.1-201ENST00000524499 1264 ntBASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 BANF1P1-201ENST00000553684 263 ntBASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 KRT8P12-202ENST00000472924 1397 ntBASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 TUBB3P1-201ENST00000405796 1332 ntBASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 AL139400.1-201ENST00000366220 510 ntBASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 SERBP1P3-201ENST00000459980 809 ntBASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 AL589739.1-201ENST00000607720 493 ntBASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 AL133215.2-201ENST00000609242 977 ntBASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRFBP1Q8NEF9 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SRFBP1Q8NEF9 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
SRFBP1Q8NEF9 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SRFBP1Q8NEF9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.21■□□□□ 0.02
SRFBP1Q8NEF9 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
SRFBP1Q8NEF9 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.21■□□□□ 0.02
SRFBP1Q8NEF9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SRFBP1Q8NEF9 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.02
SRFBP1Q8NEF9 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.21■□□□□ 0.02
SRFBP1Q8NEF9 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SRFBP1Q8NEF9 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 FAM86GP-201ENST00000448322 971 ntBASIC15.2■□□□□ 0.02
SRFBP1Q8NEF9 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms