Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 AC011477.6-201ENST00000604980 1927 ntBASIC16.06■□□□□ 0.16
RAPH1Q70E73 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RAPH1Q70E73 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 WASH6P-202ENST00000359512 1437 ntBASIC16.06■□□□□ 0.16
RAPH1Q70E73 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.06■□□□□ 0.16
RAPH1Q70E73 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.06■□□□□ 0.16
RAPH1Q70E73 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.06■□□□□ 0.16
RAPH1Q70E73 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.06■□□□□ 0.16
RAPH1Q70E73 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.06■□□□□ 0.16
RAPH1Q70E73 KRT126P-201ENST00000549467 1181 ntBASIC16.06■□□□□ 0.16
RAPH1Q70E73 KRT19P2-202ENST00000557173 1012 ntBASIC16.06■□□□□ 0.16
RAPH1Q70E73 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
RAPH1Q70E73 AC002347.1-201ENST00000569543 541 ntBASIC16.06■□□□□ 0.16
RAPH1Q70E73 MIR4321-201ENST00000592276 80 ntBASIC16.06■□□□□ 0.16
RAPH1Q70E73 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.06■□□□□ 0.16
RAPH1Q70E73 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.06■□□□□ 0.16
RAPH1Q70E73 AL161645.1-201ENST00000622716 1255 ntBASIC16.06■□□□□ 0.16
RAPH1Q70E73 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RAPH1Q70E73 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
RAPH1Q70E73 SNX18-202ENST00000343017 3140 ntBASIC16.06■□□□□ 0.16
RAPH1Q70E73 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.06■□□□□ 0.16
RAPH1Q70E73 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.06■□□□□ 0.16
RAPH1Q70E73 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.05■□□□□ 0.16
RAPH1Q70E73 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAPH1Q70E73 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RAPH1Q70E73 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAPH1Q70E73 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.05■□□□□ 0.16
RAPH1Q70E73 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAPH1Q70E73 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAPH1Q70E73 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAPH1Q70E73 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAPH1Q70E73 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.05■□□□□ 0.16
RAPH1Q70E73 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAPH1Q70E73 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAPH1Q70E73 HLA-A-201ENST00000376802 1334 ntBASIC16.05■□□□□ 0.16
RAPH1Q70E73 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAPH1Q70E73 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAPH1Q70E73 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RAPH1Q70E73 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAPH1Q70E73 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RAPH1Q70E73 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RAPH1Q70E73 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAPH1Q70E73 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.05■□□□□ 0.16
RAPH1Q70E73 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.05■□□□□ 0.16
RAPH1Q70E73 AC007967.2-201ENST00000432613 625 ntBASIC16.05■□□□□ 0.16
RAPH1Q70E73 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.05■□□□□ 0.16
RAPH1Q70E73 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.05■□□□□ 0.16
RAPH1Q70E73 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.05■□□□□ 0.16
RAPH1Q70E73 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RAPH1Q70E73 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAPH1Q70E73 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.05■□□□□ 0.16
RAPH1Q70E73 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAPH1Q70E73 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAPH1Q70E73 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAPH1Q70E73 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RAPH1Q70E73 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAPH1Q70E73 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAPH1Q70E73 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.04■□□□□ 0.16
RAPH1Q70E73 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.04■□□□□ 0.16
RAPH1Q70E73 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAPH1Q70E73 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAPH1Q70E73 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAPH1Q70E73 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.04■□□□□ 0.16
RAPH1Q70E73 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAPH1Q70E73 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAPH1Q70E73 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.04■□□□□ 0.16
RAPH1Q70E73 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RAPH1Q70E73 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.04■□□□□ 0.16
RAPH1Q70E73 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RAPH1Q70E73 AC020658.6-201ENST00000623564 1870 ntBASIC16.04■□□□□ 0.16
RAPH1Q70E73 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.04■□□□□ 0.16
RAPH1Q70E73 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.04■□□□□ 0.16
RAPH1Q70E73 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAPH1Q70E73 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.04■□□□□ 0.16
RAPH1Q70E73 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.04■□□□□ 0.16
RAPH1Q70E73 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.04■□□□□ 0.16
RAPH1Q70E73 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.04■□□□□ 0.16
RAPH1Q70E73 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.04■□□□□ 0.16
RAPH1Q70E73 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.04■□□□□ 0.16
RAPH1Q70E73 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.04■□□□□ 0.16
RAPH1Q70E73 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.04■□□□□ 0.16
RAPH1Q70E73 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RAPH1Q70E73 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAPH1Q70E73 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RAPH1Q70E73 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms