Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.56□□□□□ -0.08
LTBQ06643 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.56□□□□□ -0.08
LTBQ06643 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBQ06643 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LTBQ06643 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.56□□□□□ -0.08
LTBQ06643 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBQ06643 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBQ06643 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.56□□□□□ -0.08
LTBQ06643 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.56□□□□□ -0.08
LTBQ06643 AC004461.1-201ENST00000412461 403 ntBASIC14.56□□□□□ -0.08
LTBQ06643 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.56□□□□□ -0.08
LTBQ06643 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.56□□□□□ -0.08
LTBQ06643 RN7SL589P-201ENST00000481268 310 ntBASIC14.56□□□□□ -0.08
LTBQ06643 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.56□□□□□ -0.08
LTBQ06643 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.56□□□□□ -0.08
LTBQ06643 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.56□□□□□ -0.08
LTBQ06643 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.56□□□□□ -0.08
LTBQ06643 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.56□□□□□ -0.08
LTBQ06643 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.56□□□□□ -0.08
LTBQ06643 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.56□□□□□ -0.08
LTBQ06643 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.56□□□□□ -0.08
LTBQ06643 DBET-201ENST00000630918 3363 ntBASIC14.56□□□□□ -0.08
LTBQ06643 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBQ06643 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.56□□□□□ -0.08
LTBQ06643 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBQ06643 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBQ06643 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.56□□□□□ -0.08
LTBQ06643 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LTBQ06643 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBQ06643 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBQ06643 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBQ06643 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBQ06643 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LTBQ06643 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBQ06643 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBQ06643 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBQ06643 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.56□□□□□ -0.08
LTBQ06643 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LTBQ06643 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBQ06643 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LTBQ06643 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBQ06643 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LTBQ06643 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
LTBQ06643 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.55□□□□□ -0.08
LTBQ06643 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LTBQ06643 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LTBQ06643 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LTBQ06643 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LTBQ06643 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.55□□□□□ -0.08
LTBQ06643 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 OR8S1-201ENST00000310194 1080 ntBASIC14.55□□□□□ -0.08
LTBQ06643 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.55□□□□□ -0.08
LTBQ06643 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 AC022494.1-201ENST00000466044 728 ntBASIC14.55□□□□□ -0.08
LTBQ06643 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.55□□□□□ -0.08
LTBQ06643 AC069335.1-201ENST00000489972 472 ntBASIC14.55□□□□□ -0.08
LTBQ06643 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.55□□□□□ -0.08
LTBQ06643 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.55□□□□□ -0.08
LTBQ06643 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.55□□□□□ -0.08
LTBQ06643 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.55□□□□□ -0.08
LTBQ06643 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.55□□□□□ -0.08
LTBQ06643 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.55□□□□□ -0.08
LTBQ06643 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.55□□□□□ -0.08
LTBQ06643 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.55□□□□□ -0.08
LTBQ06643 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.55□□□□□ -0.08
LTBQ06643 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
LTBQ06643 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.55□□□□□ -0.08
LTBQ06643 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.55□□□□□ -0.08
LTBQ06643 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.55□□□□□ -0.08
LTBQ06643 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.55□□□□□ -0.08
LTBQ06643 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.55□□□□□ -0.08
LTBQ06643 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.55□□□□□ -0.08
LTBQ06643 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LTBQ06643 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LTBQ06643 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBQ06643 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBQ06643 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.54□□□□□ -0.08
LTBQ06643 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LTBQ06643 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LTBQ06643 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LTBQ06643 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms