Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BRPF1P55201 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
BRPF1P55201 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
BRPF1P55201 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BRPF1P55201 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRPF1P55201 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
BRPF1P55201 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BRPF1P55201 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BRPF1P55201 BTBD7P1-201ENST00000447253 1453 ntBASIC20.18■□□□□ 0.82
BRPF1P55201 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC20.18■□□□□ 0.82
BRPF1P55201 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
BRPF1P55201 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
BRPF1P55201 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC20.18■□□□□ 0.82
BRPF1P55201 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BRPF1P55201 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC20.18■□□□□ 0.82
BRPF1P55201 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.18■□□□□ 0.82
BRPF1P55201 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC20.18■□□□□ 0.82
BRPF1P55201 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
BRPF1P55201 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRPF1P55201 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BRPF1P55201 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BRPF1P55201 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRPF1P55201 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.18■□□□□ 0.82
BRPF1P55201 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.18■□□□□ 0.82
BRPF1P55201 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRPF1P55201 USP40-206ENST00000443711 628 ntTSL 2 BASIC20.18■□□□□ 0.82
BRPF1P55201 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC20.18■□□□□ 0.82
BRPF1P55201 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC20.18■□□□□ 0.82
BRPF1P55201 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC20.18■□□□□ 0.82
BRPF1P55201 AC092337.1-201ENST00000568699 1129 ntBASIC20.18■□□□□ 0.82
BRPF1P55201 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.18■□□□□ 0.82
BRPF1P55201 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.18■□□□□ 0.82
BRPF1P55201 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
BRPF1P55201 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRPF1P55201 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRPF1P55201 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRPF1P55201 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BRPF1P55201 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
BRPF1P55201 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
BRPF1P55201 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC20.18■□□□□ 0.82
BRPF1P55201 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRPF1P55201 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BRPF1P55201 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRPF1P55201 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRPF1P55201 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRPF1P55201 STK33-217ENST00000534493 1895 ntTSL 2 BASIC20.18■□□□□ 0.82
BRPF1P55201 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC20.17■□□□□ 0.82
BRPF1P55201 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRPF1P55201 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRPF1P55201 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.17■□□□□ 0.82
BRPF1P55201 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BRPF1P55201 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BRPF1P55201 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC20.17■□□□□ 0.82
BRPF1P55201 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BRPF1P55201 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BRPF1P55201 TMBIM7P-203ENST00000641617 1718 ntBASIC20.17■□□□□ 0.82
BRPF1P55201 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC20.17■□□□□ 0.82
BRPF1P55201 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC20.17■□□□□ 0.82
BRPF1P55201 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRPF1P55201 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRPF1P55201 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BRPF1P55201 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.17■□□□□ 0.82
BRPF1P55201 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BRPF1P55201 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRPF1P55201 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRPF1P55201 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.17■□□□□ 0.82
BRPF1P55201 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRPF1P55201 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BRPF1P55201 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.17■□□□□ 0.82
BRPF1P55201 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.17■□□□□ 0.82
BRPF1P55201 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.17■□□□□ 0.82
BRPF1P55201 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BRPF1P55201 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRPF1P55201 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BRPF1P55201 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC20.17■□□□□ 0.82
BRPF1P55201 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRPF1P55201 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRPF1P55201 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRPF1P55201 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRPF1P55201 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC20.17■□□□□ 0.82
BRPF1P55201 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
BRPF1P55201 SSR4P1-203ENST00000599569 2260 ntBASIC20.16■□□□□ 0.82
BRPF1P55201 AC009090.5-201ENST00000624886 2285 ntBASIC20.16■□□□□ 0.82
BRPF1P55201 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BRPF1P55201 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRPF1P55201 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.16■□□□□ 0.82
BRPF1P55201 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRPF1P55201 AC092850.2-201ENST00000623821 2697 ntBASIC20.16■□□□□ 0.82
BRPF1P55201 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC20.16■□□□□ 0.82
BRPF1P55201 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRPF1P55201 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRPF1P55201 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRPF1P55201 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRPF1P55201 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.16■□□□□ 0.82
BRPF1P55201 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
BRPF1P55201 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.16■□□□□ 0.82
BRPF1P55201 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.16■□□□□ 0.82
BRPF1P55201 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC20.16■□□□□ 0.82
BRPF1P55201 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.16■□□□□ 0.82
BRPF1P55201 AC044860.1-202ENST00000559481 777 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms